RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 ADAM21Q9UKJ8 722 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 SMCO2A6NFE2 343 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 SEPT10Q9P0V9 454 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 NUB1Q9Y5A7 615 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 SOS2Q07890 1332 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 MAP3K7O43318 606 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 ECE1P42892 770 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 PDE6CP51160 858 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 PLTPP55058 493 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 STX1BP61266 288 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 TFAP4Q01664 338 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 BIN2Q9UBW5 565 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 THRAP3Q9Y2W1 955 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 KDM3AQ9Y4C1 1321 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 H7C0C1 242 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 GCFC2P16383 781 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 ELF1P32519 619 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 ATP5OP48047 213 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 CYP4F22Q6NT55 531 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 ARHGEF18Q6ZSZ5 1173 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 ARMC9Q7Z3E5 817 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 KRT82Q9NSB4 513 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 IRAK4Q9NWZ3 460 aa11.67□□□□□ -0.54
PKNOX1-201ENST00000291547 GAS7O60861 476 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 EEF1DP29692 281 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 RWDD2BP57060 319 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 PKP1Q13835 747 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 PDZD4Q76G19 769 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ZNF654Q8IZM8 581 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 TXLNGQ9NUQ3 528 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 NCAPD2Q15021 1401 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 GOLGA8QA0A0J9YX86 632 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 GOLGA8OA6NCC3 632 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 GOLGA8NF8WBI6 632 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 CAPN9O14815 690 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 TECP42680 631 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 MESDQ14696 234 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 TRIM42Q8IWZ5 723 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 SLC39A2Q9NP94 309 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 TRIM66O15016 1216 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 UFL1O94874 794 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 NDUFA8P51970 172 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ADAM9Q13443 819 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 TDRD7Q8NHU6 1098 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 DEPTORQ8TB45 409 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ZNF274Q96GC6 653 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ZNF532Q9HCE3 1301 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 N4BP1O75113 896 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 CORO7P57737 925 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ITKQ08881 620 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 NNTQ13423 1086 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 CLIC6Q96NY7 704 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 DSCC1Q9BVC3 393 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 QTRT2Q9H974 415 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 ORC6Q9Y5N6 252 aa11.66□□□□□ -0.54
PKNOX1-201ENST00000291547 MYO1FO00160 1098 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 ZAP70P43403 619 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 NSFP46459 744 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 SNX1Q13596 522 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 NME8Q8N427 588 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 SEPT8Q92599 483 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CCDC127Q96BQ5 260 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CALR3Q96L12 384 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 FGD4Q96M96 766 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 TSC22D3Q99576 134 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 TRIM56Q9BRZ2 755 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 POLR2BP30876 1174 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 DHX9Q08211 1270 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 PCDHA5Q9Y5H7 936 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CYP27B1O15528 508 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 TRIM37O94972 964 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 RPN1P04843 607 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 SLCO1A2P46721 670 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 FAM47AQ5JRC9 791 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CMTR1Q8N1G2 835 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CACTINQ8WUQ7 758 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-201ENST00000291547 CCDC124Q96CT7 223 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms