RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 IFNAR1P17181 557 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 TTC19Q6DKK2 380 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 EMBQ6PCB8 327 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 NFXL1Q6ZNB6 911 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 USP49Q70CQ1 688 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 ZSCAN29Q8IWY8 852 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 CHP1Q99653 195 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 PPP1R3GB7ZBB8 358 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 COPB1P53618 953 aaKnown RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 EPHB4P54760 987 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 KIAA1328Q86T90 577 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 MMGT1Q8N4V1 131 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 GGA2Q9UJY4 613 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 ODF2LQ9ULJ1 636 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 DDTLA6NHG4 134 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 PPP1R12AO14974 1030 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 IPO7O95373 1038 aaKnown RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 LIFRP42702 1097 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 GMPSP49915 693 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 ITIH3Q06033 890 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 PDCLQ13371 301 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 DRP2Q13474 957 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 CCDC40Q4G0X9 1142 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 TBC1D10BQ4KMP7 808 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 WLSQ5T9L3 541 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 N4BP2L2Q92802 583 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 EPN3Q9H201 632 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 VPS16Q9H269 839 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 VCPKMTQ9H867 229 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 JADE2Q9NQC1 790 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-201ENST00000285398 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
ERCC3-201ENST00000285398 RNF225M0QZC1 329 aaPredicted RBP11.64□□□□□ -0.55
ERCC3-201ENST00000285398 GCFC2P16383 781 aaKnown RBP11.64□□□□□ -0.55
ERCC3-201ENST00000285398 ERCC3P19447 782 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 CDC25AP30304 524 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 GUCY1A2P33402 732 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 AFMP43652 599 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 NAP1L1P55209 391 aaKnown RBP11.64□□□□□ -0.55
ERCC3-201ENST00000285398 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
ERCC3-201ENST00000285398 DPYDQ12882 1025 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 CEP85LQ5SZL2 805 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 SERPINA10Q9UK55 444 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 KCNJ14Q9UNX9 436 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
ERCC3-201ENST00000285398 A0A087X0B3 334 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 PLCG2P16885 1265 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 SCP2P22307 547 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 APBA1Q02410 837 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 DLGAP5Q15398 846 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 GPR162Q16538 588 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 CMTR1Q8N1G2 835 aaKnown RBP11.64□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 RNF181Q9P0P0 153 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 CTNND2Q9UQB3 1225 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 SLC12A7Q9Y666 1083 aa11.64□□□□□ -0.55
ERCC3-201ENST00000285398 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 RASSF9O75901 435 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 IDEP14735 1019 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 LSP1P33241 339 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 HERVK_113P62684 666 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 UBXN1Q04323 297 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 C2orf54Q08AI8 447 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 TTMPQ5BVD1 217 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 RNF187Q5TA31 235 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 IQCA1Q86XH1 822 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 ZNF646O15015 1829 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 GOLGA6L7A0A1B0GV03 622 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 PDE2AO00408 941 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 WNT10BO00744 389 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 DDNO94850 711 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 CYLC1P35663 651 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 MRPL12P52815 198 aaKnown RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
ERCC3-201ENST00000285398 TFAP4Q01664 338 aa11.63□□□□□ -0.55
ERCC3-201ENST00000285398 NR5A1Q13285 461 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms