RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 CHUKO15111 745 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 ERFP50548 548 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 FKBP3Q00688 224 aaKnown RBP17.2■□□□□ 0.34
USP43-201ENST00000285199 LRRC14Q15048 493 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 RSRC2Q7L4I2 434 aaKnown RBP17.2■□□□□ 0.34
USP43-201ENST00000285199 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
USP43-201ENST00000285199 NCAPGQ9BPX3 1015 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 LIMA1Q9UHB6 759 aaKnown RBP17.2■□□□□ 0.34
USP43-201ENST00000285199 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
USP43-201ENST00000285199 TNIP1Q15025 636 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 NLRP14Q86W24 1093 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 NAP1L3Q99457 506 aaPredicted RBP17.19■□□□□ 0.34
USP43-201ENST00000285199 RAB17Q9H0T7 212 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 CPSF2Q9P2I0 782 aaKnown RBP17.19■□□□□ 0.34
USP43-201ENST00000285199 DAAM1Q9Y4D1 1078 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 COL3A1P02461 1466 aaPredicted RBP17.19■□□□□ 0.34
USP43-201ENST00000285199 H0Y3Z8 333 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 HIP1RO75146 1068 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 HNRNPH1P31943 449 aaKnown RBP17.19■□□□□ 0.34
USP43-201ENST00000285199 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 DNAAF5Q86Y56 855 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 UBL4BQ8N7F7 174 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 STK4Q13043 487 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 UBE2SQ16763 222 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 ALKBH5Q6P6C2 394 aaKnown RBP17.19■□□□□ 0.34
USP43-201ENST00000285199 TAOK1Q7L7X3 1001 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 THAP9Q9H5L6 903 aa17.19■□□□□ 0.34
USP43-201ENST00000285199 PHF20L1A8MW92 1017 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 PGRMC1O00264 195 aaKnown RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 FGGP02679 453 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 ALDH3A1P30838 453 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 RABL6Q3YEC7 729 aaPredicted RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 CYP4F22Q6NT55 531 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 CXorf56Q9H5V9 222 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 AMACRQ9UHK6 382 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 ACSL3O95573 720 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 BMP6P22004 513 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 CCT8L2Q96SF2 557 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 ADAM33Q9BZ11 813 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 SNX12Q9UMY4 172 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 ZIM3Q96PE6 472 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 PPP1R1BQ9UD71 204 aaPredicted RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 ZSCAN5CA6NGD5 496 aaPredicted RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 PRDX5P30044 214 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 C6orf163Q5TEZ5 329 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 TCHPQ9BT92 498 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 INTS13Q9NVM9 706 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 KLHL14Q9P2G3 628 aa17.18■□□□□ 0.34
USP43-201ENST00000285199 TPX2Q9ULW0 747 aaKnown RBP17.18■□□□□ 0.34
USP43-201ENST00000285199 EIF3HO15372 352 aaKnown RBP eCLIP17.17■□□□□ 0.34
USP43-201ENST00000285199 CFBP00751 764 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 DPYDQ12882 1025 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 STMN2Q93045 179 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 MCUR1Q96AQ8 359 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.17■□□□□ 0.34
USP43-201ENST00000285199 CCDC169A6NNP5 214 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 DAPK3O43293 454 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 UFL1O94874 794 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 KLC4Q9NSK0 619 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 HAUS2Q9NVX0 235 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
USP43-201ENST00000285199 POC1B-GALNT4F8VUJ3 575 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
USP43-201ENST00000285199 DDAH1O94760 285 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 UBXN2AP68543 259 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 NUGGCQ68CJ6 796 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 FAM47EQ6ZV65 393 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
USP43-201ENST00000285199 VPS37BQ9H9H4 285 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 HOMER3Q9NSC5 361 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 COL4A3BPQ9Y5P4 624 aa17.17■□□□□ 0.34
USP43-201ENST00000285199 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 PPP1R3GB7ZBB8 358 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 SEMA3EO15041 775 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 PPP1R37O75864 691 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 SLC8A1P32418 973 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 SPATS2Q86XZ4 545 aaKnown RBP17.16■□□□□ 0.34
USP43-201ENST00000285199 FMO2Q99518 471 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
USP43-201ENST00000285199 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 ADCY8P40145 1251 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 TRAPPC10P48553 1259 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 HHATQ5VTY9 493 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 ZNF449Q6P9G9 518 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 FMNL3Q8IVF7 1028 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 LMNTD2Q8IXW0 634 aa17.16■□□□□ 0.34
USP43-201ENST00000285199 SYCE1Q8N0S2 351 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms