RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MYCLP12524 364 aaPredicted RBP24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 ITGB5P18084 799 aa24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 NASPP49321 788 aaPredicted RBP24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 IWS1Q96ST2 819 aa24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 NUDT12Q9BQG2 462 aa24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 GDPD2Q9HCC8 539 aa24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 GABRQQ9UN88 632 aa24.79■■□□□ 1.56
PDLIM3-203ENST00000284771 RGS20O76081 388 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 HOXC6P09630 235 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 ATL3Q6DD88 541 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 MAML3Q96JK9 1138 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 DIS3Q9Y2L1 958 aaKnown RBP24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 KRT85P78386 507 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 CEP55Q53EZ4 464 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 MOXD1Q6UVY6 613 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 JMYQ8N9B5 988 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 LINC00301Q8NCQ3 95 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 TMEM60Q9H2L4 133 aa24.78■■□□□ 1.56
PDLIM3-203ENST00000284771 FKTNO75072 461 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 NCLP19338 710 aaKnown RBP24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 CYP2B6P20813 491 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 PTGDRQ13258 359 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 POTEDQ86YR6 584 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 MORC4Q8TE76 937 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 FLRT1Q9NZU1 646 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 CFAP45Q9UL16 551 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 UBIAD1Q9Y5Z9 338 aa24.77■■□□□ 1.56
PDLIM3-203ENST00000284771 MEIS1O00470 390 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 KIF22Q14807 665 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 SLC39A14Q15043 492 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 CCL14Q16627 93 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 PRR16Q569H4 304 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 ZNF467Q7Z7K2 595 aaPredicted RBP24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 SOCS4Q8WXH5 440 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 MXRA8Q9BRK3 442 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 WDR11Q9BZH6 1224 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 DDX25Q9UHL0 483 aaKnown RBP24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 RCOR1Q9UKL0 485 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 LRRC37A2A6NM11 1700 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 HTTP42858 3142 aa24.76■■□□□ 1.55
PDLIM3-203ENST00000284771 FIBPO43427 364 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 GCFC2P16383 781 aaKnown RBP24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 CCND2P30279 289 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 ZNF76P36508 570 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 FLT3LGP49771 235 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 PRKCZQ05513 592 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 STXBP2Q15833 593 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 Q4G0T1 1027 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 XRRA1Q6P2D8 792 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 MAMDC4Q6UXC1 1216 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 GJA10Q969M2 543 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 UIMC1Q96RL1 719 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 IGHA2P01877 340 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 ARMCX2Q7L311 632 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 LEO1Q8WVC0 666 aaPredicted RBP24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 HAS1Q92839 578 aa24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 INPP4AQ96PE3 977 aaPredicted RBP24.75■■□□□ 1.55
PDLIM3-203ENST00000284771 NEMFO60524 1076 aa24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 ARP10275 920 aa24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 RGS2P41220 211 aa24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 ATP2C1P98194 919 aaPredicted RBP24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 EEPD1Q7L9B9 569 aa24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 MTMR9Q96QG7 549 aa24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 JADE2Q9NQC1 790 aa24.74■■□□□ 1.55
PDLIM3-203ENST00000284771 KIAA1217Q5T5P2 1943 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 LOC102724159A0A0B4J2E5 919 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 ASB14A6NK59 587 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 EIF3JO75822 258 aaKnown RBP24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 YEATS4O95619 227 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 SNAI1O95863 264 aaPredicted RBP24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 MARCKSP29966 332 aaPredicted RBP24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 PDE4DQ08499 809 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 PWP2Q15269 919 aaKnown RBP24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 TINF2Q9BSI4 451 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 KCNMB3Q9NPA1 279 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 KCNH7Q9NS40 1196 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 SLC5A4Q9NY91 659 aa24.73■■□□□ 1.55
PDLIM3-203ENST00000284771 MSH4O15457 936 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 SEMA3FQ13275 785 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 ORC2Q13416 577 aaPredicted RBP24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 IL17AQ16552 155 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 PLA2G4DQ86XP0 818 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 ETNPPLQ8TBG4 499 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 ERO1AQ96HE7 468 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 NAP1L4Q99733 375 aaKnown RBP24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 APBA2Q99767 749 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 SCAND2PQ9GZW5 306 aaPredicted RBP24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 SRRDQ9UH36 339 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 SPTLC2O15270 562 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 XRCC5P13010 732 aaKnown RBP24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 STK38Q15208 465 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 SPATA32Q96LK8 384 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 KATNBL1Q9H079 304 aa24.72■■□□□ 1.55
PDLIM3-203ENST00000284771 STAM2O75886 525 aa24.71■■□□□ 1.55
PDLIM3-203ENST00000284771 GRIN1Q05586 938 aa24.71■■□□□ 1.55
PDLIM3-203ENST00000284771 NIPA1Q7RTP0 329 aa24.71■■□□□ 1.55
PDLIM3-203ENST00000284771 CEP131Q9UPN4 1083 aa24.71■■□□□ 1.55
PDLIM3-203ENST00000284771 B4DLN1 442 aa24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 ATP9AO75110 1047 aa24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 MTMR1Q13613 665 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms