RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 SMARCA5O60264 1052 aaPredicted RBP14.12□□□□□ -0.15
SPC25-201ENST00000282074 NBNO60934 754 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 CKBP12277 381 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
SPC25-201ENST00000282074 EDNRBP24530 442 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 SLC16A2P36021 539 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 SYDE2Q5VT97 1194 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 GDF6Q6KF10 455 aaPredicted RBP14.12□□□□□ -0.15
SPC25-201ENST00000282074 FAM117BQ6P1L5 589 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 SLC30A10Q6XR72 485 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 MRPL38Q96DV4 380 aaKnown RBP14.12□□□□□ -0.15
SPC25-201ENST00000282074 IL17RBQ9NRM6 502 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 PRKAG3Q9UGI9 489 aa14.12□□□□□ -0.15
SPC25-201ENST00000282074 COL4A4P53420 1690 aaPredicted RBP14.12□□□□□ -0.15
SPC25-201ENST00000282074 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
SPC25-201ENST00000282074 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 TTBK2Q6IQ55 1244 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 AFG1LQ8WV93 481 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 CLEC4DQ8WXI8 215 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
SPC25-201ENST00000282074 SNX27Q96L92 541 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 MFSD14AQ96MC6 490 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 SAMD11Q96NU1 681 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 CTAGE1Q96RT6 745 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 LCTP09848 1927 aa14.11□□□□□ -0.15
SPC25-201ENST00000282074 H3BQ06 376 aaPredicted RBP14.1□□□□□ -0.15
SPC25-201ENST00000282074 RANBP6O60518 1105 aaKnown RBP14.1□□□□□ -0.15
SPC25-201ENST00000282074 NMT2O60551 498 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 GH1P01241 217 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 AMHP03971 560 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 MMP3P08254 477 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 PTK7Q13308 1070 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 DGKDQ16760 1214 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 EP400NLQ6ZTU2 488 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 C17orf80Q9BSJ5 609 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 GTF2IRD1Q9UHL9 959 aa14.1□□□□□ -0.15
SPC25-201ENST00000282074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPC25-201ENST00000282074 NOVP48745 357 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 RASGRP2Q7LDG7 609 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 BANK1Q8NDB2 785 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 RGS22Q8NE09 1264 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 KAT2BQ92831 832 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 PABPC5Q96DU9 382 aaKnown RBP14.09□□□□□ -0.15
SPC25-201ENST00000282074 KATNAL1Q9BW62 490 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 GPCPD1Q9NPB8 672 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 EMSYQ7Z589 1322 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 PTPRSQ13332 1948 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 NCK2O43639 380 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 LGR5O75473 907 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 ARIH2O95376 493 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
SPC25-201ENST00000282074 ZP2Q05996 745 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 CTDSPL2Q05D32 466 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 ADHFE1Q8IWW8 467 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 MYOCDQ8IZQ8 938 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 MAF1Q9H063 256 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 HDAC6Q9UBN7 1215 aa14.09□□□□□ -0.15
SPC25-201ENST00000282074 FRMPD2Q68DX3 1309 aaPredicted RBP14.08□□□□□ -0.16
SPC25-201ENST00000282074 WDR19Q8NEZ3 1342 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 SIP14410 1827 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 PSEN2P49810 448 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 HTRA4P83105 476 aaPredicted RBP14.08□□□□□ -0.16
SPC25-201ENST00000282074 HNRNPUQ00839 825 aaKnown RBP eCLIP14.08□□□□□ -0.16
SPC25-201ENST00000282074 GPM6BQ13491 265 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 LY6KQ17RY6 165 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 TCTN1Q2MV58 587 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 EPC2Q52LR7 807 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 ZNF618Q5T7W0 954 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 SEPT14Q6ZU15 432 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 SEC62Q99442 399 aaKnown RBP14.08□□□□□ -0.16
SPC25-201ENST00000282074 ALG1Q9BT22 464 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
SPC25-201ENST00000282074 H3BNC9 293 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 ORC4O43929 436 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 ARHGAP1Q07960 439 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 STXBP2Q15833 593 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 TCEAL5Q5H9L2 206 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 TSHZ3Q63HK5 1081 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
SPC25-201ENST00000282074 HFE2Q6ZVN8 426 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 NSUN6Q8TEA1 469 aaKnown RBP14.07□□□□□ -0.16
SPC25-201ENST00000282074 YME1L1Q96TA2 773 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 POP1Q99575 1024 aaKnown RBP14.07□□□□□ -0.16
SPC25-201ENST00000282074 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 NSUN3Q9H649 340 aaKnown RBP14.07□□□□□ -0.16
SPC25-201ENST00000282074 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
SPC25-201ENST00000282074 LAMC2Q13753 1193 aa14.06□□□□□ -0.16
SPC25-201ENST00000282074 MFSD10Q14728 455 aa14.06□□□□□ -0.16
SPC25-201ENST00000282074 KIAA0753Q2KHM9 967 aa14.06□□□□□ -0.16
SPC25-201ENST00000282074 TRIM71Q2Q1W2 868 aaKnown RBP14.06□□□□□ -0.16
SPC25-201ENST00000282074 ZMYM1Q5SVZ6 1142 aa14.06□□□□□ -0.16
SPC25-201ENST00000282074 TRAF7Q6Q0C0 670 aa14.06□□□□□ -0.16
SPC25-201ENST00000282074 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
SPC25-201ENST00000282074 DBF4BQ8NFT6 615 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms