RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 MYL3P08590 195 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ACTN1P12814 892 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 CASP14P31944 242 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 H2AFZP0C0S5 128 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 USP14P54578 494 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 PPFIA1Q13136 1202 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 PDE1CQ14123 709 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 H2AFVQ71UI9 128 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 CROCCP2Q86T23 111 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ATP6V0A1Q93050 837 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 CCDC51Q96ER9 411 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 NR5A1Q13285 461 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 NLRP4Q96MN2 994 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 METTL14Q9HCE5 456 aaKnown RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 PTPREP23469 700 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 TYW5A2RUC4 315 aaKnown RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 MAPK4P31152 587 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ADD2P35612 726 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 MECOMQ03112 1051 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 MMEL1Q495T6 779 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 GPT2Q8TD30 523 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ZMYND10O75800 440 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 CLNS1AP54105 237 aaKnown RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 GUCY2DQ02846 1103 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 CC2D2BQ6DHV5 1058 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 RNF10Q8N5U6 811 aaKnown RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-201ENST00000275233 ANGPTL3Q9Y5C1 460 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 SETD1BQ9UPS6 1966 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 SFI1A8K8P3 1242 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 GFPT2O94808 682 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 S100BP04271 92 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 CXCR5P32302 372 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 CTTNQ14247 550 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 GPATCH4Q5T3I0 446 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 FAM186BQ8IYM0 893 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 IPO11Q9UI26 975 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 POLIQ9UNA4 740 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 TRIM68Q6AZZ1 485 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 MYRIPQ8NFW9 859 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 MICAL1Q8TDZ2 1067 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 MAP7Q14244 749 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 FAM49AQ9H0Q0 323 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 SERPINB13Q9UIV8 391 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 TSNAXIP1Q2TAA8 658 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 INSRP06213 1382 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 MYO1FO00160 1098 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 GARSP41250 739 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 RBL2Q08999 1139 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 KCTD16Q68DU8 428 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 FAM133AQ8N9E0 248 aa12.92□□□□□ -0.34
SHPRH-201ENST00000275233 SUDS3Q9H7L9 328 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 NOC2LQ9Y3T9 749 aaKnown RBP12.92□□□□□ -0.34
SHPRH-201ENST00000275233 PFDN6O15212 129 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 AFPP02771 609 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 RFC1P35251 1148 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 TRIP13Q15645 432 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 EPN1Q9Y6I3 576 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 CIAO1O76071 339 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 CYP21A2P08686 494 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 PDE1BQ01064 536 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 IQCDQ96DY2 449 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 RAB3IPQ96QF0 476 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 CPSF3Q9UKF6 684 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 PPP1R12AO14974 1030 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 KRT3P12035 628 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 LMNB1P20700 586 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 AOC3Q16853 763 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 MAGOHBQ96A72 148 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 ALKBH8Q96BT7 664 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 MIS12Q9H081 205 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 STK25O00506 426 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
SHPRH-201ENST00000275233 DNAAF3Q8N9W5 541 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms