RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 C6orf183Q5T699 404 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PPP1R2P3Q6NXS1 205 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 MFSD6Q6ZSS7 791 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ZKSCAN4Q969J2 545 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 E2F7Q96AV8 911 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 FGD4Q96M96 766 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 HAUS8Q9BT25 410 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 HYPKQ9NX55 129 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ATXN10Q9UBB4 475 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 SPG7Q9UQ90 795 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 F8W810 466 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ATG7O95352 703 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 HADHAP40939 763 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 NLRP12P59046 1061 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 DSTNP60981 165 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 TRIM14Q14142 442 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 ZSCAN23Q3MJ62 389 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC83Q8IWF9 413 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 GIMAP8Q8ND71 665 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 HERC2P3Q9BVR0 1158 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 RNF17Q9BXT8 1623 aaKnown RBP9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 TBC1D8O95759 1140 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 SLFN5Q08AF3 891 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 LRRC41Q15345 812 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 IFT81Q8WYA0 676 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC77Q9BR77 488 aa9.7□□□□□ -0.86
CTDSPL-201ENST00000273179 PLCD1P51178 756 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 PPIDQ08752 370 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 ALFQ53S48 1182 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 C20orf194Q5TEA3 1177 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 INTS8Q75QN2 995 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 PALM2Q8IXS6 379 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 GDAP1Q8TB36 358 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 JPH3Q8WXH2 748 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 VWDEQ8N2E2 1590 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 SH3D21A4FU49 640 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 RPL13P26373 211 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 PLA2G4AP47712 749 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 MYO1EQ12965 1108 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 CUL1Q13616 776 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 COLGALT2Q8IYK4 626 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 C14orf93Q9H972 538 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 TUFT1Q9NNX1 390 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 CTIFO43310 598 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 GOLGA8FQ08AF8 430 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 GOLGA8DPQ0D2H9 430 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 KLHL30Q0D2K2 578 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 CLPPQ16740 277 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 EPS8L3Q8TE67 593 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 ATP6V0A4Q9HBG4 840 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 MRPL39Q9NYK5 338 aaKnown RBP9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 SH3BGRL2Q9UJC5 107 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 NSD2O96028 1365 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 ZMYM3Q14202 1370 aa9.69□□□□□ -0.86
CTDSPL-201ENST00000273179 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 PI4K2BG5E9Z4 385 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 POLR2EP19388 210 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 TMEM62Q0P6H9 643 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ZNF574Q6ZN55 896 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 PI4K2BQ8TCG2 481 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 NRBF2Q96F24 287 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 TNIP3Q96KP6 325 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 RBM14Q96PK6 669 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ANO10Q9NW15 660 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 POLD2P49005 469 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 UBXN1Q04323 297 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 SIM2Q14190 667 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 GNA13Q14344 377 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 CABP7Q86V35 215 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 SPATA24Q86W54 205 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 TEX9Q8N6V9 391 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 PSTPIP2Q9H939 334 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 C9orf78Q9NZ63 289 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ATP6V1HQ9UI12 483 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 GTF2A1LQ9UNN4 478 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 MRPL11Q9Y3B7 192 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ERVK-7P63135 1459 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 IFRD1O00458 451 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ATP5OP48047 213 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 USP11P51784 963 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 BPIFB3P59826 476 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 RUNX1T1Q06455 604 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ZCCHC17Q9NP64 241 aaKnown RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 MLH3Q9UHC1 1453 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 GCOM1H8Y6P7 765 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 TMCC2O75069 709 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 ATP2C2O75185 946 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 CSNK2BP67870 215 aa9.68□□□□□ -0.86
CTDSPL-201ENST00000273179 MRPS5P82675 430 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms