RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 ATP2A1O14983 1001 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 RAB11FIP3O75154 756 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 CAVIN2O95810 425 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 PSMC6P62333 389 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 DHX8Q14562 1220 aaKnown RBP7.54□□□□□ -1.2
CD53-201ENST00000271324 SBK1Q52WX2 424 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 EEPD1Q7L9B9 569 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
CD53-201ENST00000271324 TMEM199Q8N511 208 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 PCSK9Q8NBP7 692 aaKnown RBP7.54□□□□□ -1.2
CD53-201ENST00000271324 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 ADAMTS19Q8TE59 1207 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 SCLYQ96I15 445 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 ASB2Q96Q27 587 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 ABHD16BQ9H3Z7 469 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 IL23AQ9NPF7 189 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 INCENPQ9NQS7 918 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 ARGLU1Q9NWB6 273 aaPredicted RBP7.54□□□□□ -1.2
CD53-201ENST00000271324 CWC15Q9P013 229 aaKnown RBP7.54□□□□□ -1.2
CD53-201ENST00000271324 PYCARDQ9ULZ3 195 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 ZNF536O15090 1300 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 MYH7BA7E2Y1 1941 aa7.54□□□□□ -1.2
CD53-201ENST00000271324 TMEM232C9JQI7 657 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 RFXAPO00287 272 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 NRDCO43847 1150 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 B4GALT4O60513 344 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 SMPD1P17405 629 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 TNNT3P45378 269 aaPredicted RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 TPM4P67936 248 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 TFF2Q03403 129 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 GPS2Q13227 327 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 BMS1Q14692 1282 aaKnown RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 MUM1L1Q5H9M0 696 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 CEP135Q66GS9 1140 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 SLFN13Q68D06 897 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 NOL8Q76FK4 1167 aaKnown RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 TXLNBQ8N3L3 684 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 FAM133AQ8N9E0 248 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 SLC43A3Q8NBI5 491 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 SPC24Q8NBT2 197 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 ATXN2LQ8WWM7 1075 aaKnown RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 HERVK_113Q902F9 699 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 MKL1Q969V6 931 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 SEC62Q99442 399 aaKnown RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 TANC1Q9C0D5 1861 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 WNT8AQ9H1J5 351 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 HIPK3Q9H422 1215 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 OSBPL3Q9H4L5 887 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 SPC25Q9HBM1 224 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 MTMR4Q9NYA4 1195 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 THEGQ9P2T0 379 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 FEM1BQ9UK73 627 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 GNEQ9Y223 722 aaKnown RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 CTDP1Q9Y5B0 961 aaPredicted RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 C5orf42Q9H799 3197 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 COL4A4P53420 1690 aaPredicted RBP7.53□□□□□ -1.2
CD53-201ENST00000271324 MYH6P13533 1939 aa7.53□□□□□ -1.2
CD53-201ENST00000271324 VGLL3A8MV65 326 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 DYNC1LI2O43237 492 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 GPAA1O43292 621 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 GADD45BO75293 160 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 FGBP02675 491 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 TUBB4AP04350 444 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 APPP05067 770 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 BMP3P12645 472 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 CDC25BP30305 580 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 TDO2P48775 406 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 EMP3P54852 163 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 MRPS5P82675 430 aaKnown RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 ITGA7Q13683 1181 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 AKNAD1Q5T1N1 836 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 ZSCAN25Q6NSZ9 544 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 TAPT1Q6NXT6 567 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 PSRC1Q6PGN9 363 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 CCDC174Q6PII3 467 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 KCTD1Q719H9 257 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.52□□□□□ -1.2
CD53-201ENST00000271324 TLK2Q86UE8 772 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 FBXO16Q8IX29 292 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 ZNF444Q8N0Y2 327 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 CHST13Q8NET6 341 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 IL17RAQ96F46 866 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 C16orf45Q96MC5 204 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 UHRF1Q96T88 793 aaPredicted RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 NOC4LQ9BVI4 516 aaKnown RBP7.52□□□□□ -1.2
CD53-201ENST00000271324 LRRCC1Q9C099 1032 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 KCNF1Q9H3M0 494 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 CERS4Q9HA82 394 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 RNF146Q9NTX7 359 aa7.52□□□□□ -1.2
CD53-201ENST00000271324 MSRAQ9UJ68 235 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms