RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 POTECB2RU33 542 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 KCNJ18B7U540 433 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 MEIS1O00470 390 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 TBC1D12O60347 775 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 UBXN1Q04323 297 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 KCNJ12Q14500 433 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
SLC6A3-201ENST00000270349 GAS7O60861 476 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 USP14P54578 494 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 HERC4Q5GLZ8 1057 aaPredicted RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 VSTM4Q8IW00 320 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 FAM114A1Q8IWE2 563 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 TBCAO75347 108 aaKnown RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 NAALADL2Q58DX5 795 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 CCDC112Q8NEF3 446 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 GTPBP4Q9BZE4 634 aaKnown RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 E9PMD0 336 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 MEIS2O14770 477 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 LMNB1P20700 586 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 ADKP55263 362 aaKnown RBP13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 LRCH2Q5VUJ6 765 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 TBC1D5Q92609 795 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 RAD54LQ92698 747 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 AGBL1Q96MI9 1066 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 MTMR9Q96QG7 549 aa13.15□□□□□ -0.3
SLC6A3-201ENST00000270349 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 GRB10Q13322 594 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 WDR46O15213 610 aaKnown RBP13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 FGFR1OPO95684 399 aaKnown RBP13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 FCER1AP12319 257 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 ERCC3P19447 782 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 EPS15P42566 896 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 DDX12PQ92771 950 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 MTRQ99707 1265 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 ABCB11O95342 1321 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 CCP110O43303 1012 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 PPP1R2P41236 205 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 LRRC41Q15345 812 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 SPATA20Q8TB22 786 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 LPAR1Q92633 364 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 NUDT12Q9BQG2 462 aa13.14□□□□□ -0.31
SLC6A3-201ENST00000270349 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 PLA2G4BP0C869 781 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 KCNB1Q14721 858 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 CCDC40Q4G0X9 1142 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 POTEGQ6S5H5 508 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 MYMKA6NI61 221 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 KIF20AO95235 890 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 MMP14P50281 582 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 HMGCS2P54868 508 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 ZNF280AP59817 542 aaPredicted RBP13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 DGKZQ13574 1117 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 NELFCDQ8IXH7 590 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 P2RX5Q93086 422 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 BAG1Q99933 345 aaPredicted RBP13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLC6A3-201ENST00000270349 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 SREBF1P36956 1147 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 CLK2P49760 499 aaKnown RBP13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 KRT31Q15323 416 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 HAS1Q92839 578 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 FAM20AQ96MK3 541 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 C7orf25Q9BPX7 421 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms