RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 SLC39A2Q9NP94 309 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 PPP2R2CQ9Y2T4 447 aa18.89■□□□□ 0.61
CHKA-201ENST00000265689 CCP110O43303 1012 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 CTIFO43310 598 aaKnown RBP18.88■□□□□ 0.61
CHKA-201ENST00000265689 GYPCP04921 128 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 KIAA0895Q8NCT3 520 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 P2RX5Q93086 422 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 ZBTB21Q9ULJ3 1066 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 FXR1P51114 621 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHKA-201ENST00000265689 ARHGAP4P98171 946 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 MTF1Q14872 753 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 ANKRD40Q6AI12 368 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 ZNF710Q8N1W2 664 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 NAP1L4Q99733 375 aaKnown RBP18.88■□□□□ 0.61
CHKA-201ENST00000265689 SYT17Q9BSW7 474 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 THAP9Q9H5L6 903 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 ARHGEF10LQ9HCE6 1279 aa18.88■□□□□ 0.61
CHKA-201ENST00000265689 ITIH6Q6UXX5 1313 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 OPLAHO14841 1288 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 MFAP3LO75121 409 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 CCNE1P24864 410 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 AP3B2Q13367 1082 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 CNNM4Q6P4Q7 775 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 CSGALNACT2Q8N6G5 542 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 KCNMB3Q9NPA1 279 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 CYP3A7-CYP3A51PA0A087WV96 503 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 SOWAHDA6NJG2 315 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 CYP3A7P24462 503 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
CHKA-201ENST00000265689 UBXN1Q04323 297 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 CRYGNQ8WXF5 182 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 ZMYND15Q9H091 742 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 TMX2Q9Y320 296 aa18.87■□□□□ 0.61
CHKA-201ENST00000265689 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
CHKA-201ENST00000265689 RNF225M0QZC1 329 aaPredicted RBP18.86■□□□□ 0.61
CHKA-201ENST00000265689 UNC13DQ70J99 1090 aa18.86■□□□□ 0.61
CHKA-201ENST00000265689 AGBL3Q8NEM8 1001 aa18.86■□□□□ 0.61
CHKA-201ENST00000265689 DESI2Q9BSY9 194 aa18.86■□□□□ 0.61
CHKA-201ENST00000265689 CNOT7Q9UIV1 285 aaKnown RBP18.86■□□□□ 0.61
CHKA-201ENST00000265689 ZSCAN12O43309 604 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 IDEP14735 1019 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 STAT3P40763 770 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 STAT2P52630 851 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 DGKZQ13574 1117 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 ZYXQ15942 572 aaKnown RBP18.85■□□□□ 0.61
CHKA-201ENST00000265689 PRR16Q569H4 304 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 TRIM65Q6PJ69 517 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 DDX12PQ92771 950 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 MBOAT7Q96N66 472 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 VPS33BQ9H267 617 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHKA-201ENST00000265689 POLR2AP24928 1970 aaKnown RBP18.85■□□□□ 0.61
CHKA-201ENST00000265689 PVALEFA0A1B0GWK0 134 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 EEF1GP26641 437 aaKnown RBP18.85■□□□□ 0.61
CHKA-201ENST00000265689 MMP14P50281 582 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 SYNPO2Q9UMS6 1093 aa18.85■□□□□ 0.61
CHKA-201ENST00000265689 BICDL2A1A5D9 508 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 PES1O00541 588 aaKnown RBP18.84■□□□□ 0.61
CHKA-201ENST00000265689 ETF1P62495 437 aaKnown RBP18.84■□□□□ 0.61
CHKA-201ENST00000265689 MTMR14Q8NCE2 650 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 GLIS2Q9BZE0 524 aaPredicted RBP18.84■□□□□ 0.61
CHKA-201ENST00000265689 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 GOPCQ9HD26 462 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 MAGEC2Q9UBF1 373 aaPredicted RBP18.84■□□□□ 0.61
CHKA-201ENST00000265689 SBF1O95248 1867 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 LGALS16A8MUM7 142 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 FZD9O00144 591 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 NAA30Q147X3 362 aaPredicted RBP18.84■□□□□ 0.61
CHKA-201ENST00000265689 FKBP1CQ5VVH2 108 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 MB21D1Q8N884 522 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 TRPM4Q8TD43 1214 aa18.84■□□□□ 0.61
CHKA-201ENST00000265689 NOC3LQ8WTT2 800 aaKnown RBP18.84■□□□□ 0.61
CHKA-201ENST00000265689 E9PMD0 336 aa18.83■□□□□ 0.61
CHKA-201ENST00000265689 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.61
CHKA-201ENST00000265689 CNGA4Q8IV77 575 aa18.83■□□□□ 0.61
CHKA-201ENST00000265689 ETNPPLQ8TBG4 499 aa18.83■□□□□ 0.61
CHKA-201ENST00000265689 DNAI1Q9UI46 699 aa18.83■□□□□ 0.61
CHKA-201ENST00000265689 KIAA1024Q9UPX6 916 aa18.83■□□□□ 0.61
CHKA-201ENST00000265689 POTEB3A0JP26 581 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 POTECB2RU33 542 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 FAM86B1E9PN63 330 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
CHKA-201ENST00000265689 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
CHKA-201ENST00000265689 FAM86B2P0C5J1 330 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 SREBF1P36956 1147 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 RASA3Q14644 834 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 COBLL1Q53SF7 1204 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 HYIQ5T013 277 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 CCDC174Q6PII3 467 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 POTEBQ6S5H4 581 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 MOXD1Q6UVY6 613 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 ZNF507Q8TCN5 953 aa18.83■□□□□ 0.6
CHKA-201ENST00000265689 ZBED3Q96IU2 234 aaPredicted RBP18.83■□□□□ 0.6
CHKA-201ENST00000265689 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.6
CHKA-201ENST00000265689 FANCGO15287 622 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 TBC1D12O60347 775 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms