RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 EXOC7Q9UPT5 735 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 ABCB11O95342 1321 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 CDK17Q00537 523 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 SPATA4Q8NEY3 305 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 TRIM31Q9BZY9 425 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 B4DLN1 442 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 MDH1P40925 334 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 KDM7AQ6ZMT4 941 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 ITGB1BP2Q9UKP3 347 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 SDCCAG8Q86SQ7 713 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 PRLRP16471 622 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 HERC4Q5GLZ8 1057 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 MAPK8IP1Q9UQF2 711 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 DR1Q01658 176 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 LETM2Q2VYF4 491 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 RABEP2Q9H5N1 569 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 KCNJ14Q9UNX9 436 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 E2F5Q15329 346 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 CCDC93Q567U6 631 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 LRRC37BQ96QE4 947 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 LSM14BQ9BX40 385 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 VPS54Q9P1Q0 977 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 TNNI2P48788 182 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 RASSF7Q02833 373 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 PPP4R1Q8TF05 950 aa12.72□□□□□ -0.37
DNMT3A-201ENST00000264709 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 CEP72Q9P209 647 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 ADCY7P51828 1080 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 DISC1Q9NRI5 854 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 PPARAQ07869 468 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 PAGE5Q96GU1 130 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 TTC25Q96NG3 672 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 FTOQ9C0B1 505 aaKnown RBP eCLIP12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 MCM9Q9NXL9 1143 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 COL4A3BPQ9Y5P4 624 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 FSBPO95073 299 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 PSMD7P51665 324 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 FBXL16Q8N461 479 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 IL17REQ8NFR9 667 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 NDST4Q9H3R1 872 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 FAM96AQ9H5X1 160 aa12.71□□□□□ -0.37
DNMT3A-201ENST00000264709 PRPF3O43395 683 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 MORC4Q8TE76 937 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 CABP7Q86V35 215 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 SLFN12Q8IYM2 578 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 LIMA1Q9UHB6 759 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 TC2NQ8N9U0 490 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 LARP4BQ92615 738 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.38
DNMT3A-201ENST00000264709 SSU72P8A0A1W2PR75 194 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 TIMM10P62072 90 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 C2orf54Q08AI8 447 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 ATP8A1Q9Y2Q0 1164 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 GGPS1O95749 300 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CNGA1P29973 690 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 KLC1Q07866 573 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 EIF1ADQ8N9N8 165 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 SNX16P57768 344 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CCNI2Q6ZMN8 369 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 APBB1IPQ7Z5R6 666 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 NEK8Q86SG6 692 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CPDO75976 1380 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 COG7P83436 770 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.382e-7■■□□□ 12.2
DNMT3A-201ENST00000264709 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 EXOC3L4Q17RC7 722 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 CCDC68Q9H2F9 335 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 TNKSO95271 1327 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 OPHN1O60890 802 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 ECEL1O95672 775 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 NAA35Q5VZE5 725 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 EPS15L1Q9UBC2 864 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 DNM3Q9UQ16 869 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 GFPT2O94808 682 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 ATF2P15336 505 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
DNMT3A-201ENST00000264709 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 BLZF1Q9H2G9 400 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms