RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 EPHA7Q15375 998 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 PPP2R5EQ16537 467 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 CYP26C1Q6V0L0 522 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 PAGE5Q96GU1 130 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SPTLC3Q9NUV7 552 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 RNF14Q9UBS8 474 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 NUP88Q99567 741 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 XPO4Q9C0E2 1151 aaKnown RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 TTC12Q9H892 705 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 TUFT1Q9NNX1 390 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 HOXC10Q9NYD6 342 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 ZBTB21Q9ULJ3 1066 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 LRRC10BA6NIK2 292 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 FAM13AO94988 1023 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SP4Q02446 784 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 CCDC170Q8IYT3 715 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 IGSF22Q8N9C0 903 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SPATA20Q8TB22 786 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 KIAA1683Q9H0B3 1180 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 GAS7O60861 476 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 GFPT2O94808 682 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 NDUFB10O96000 172 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 MAN2A1Q16706 1144 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 DPCR1Q3MIW9 517 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 GIMAP8Q8ND71 665 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 ERO1AQ96HE7 468 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 DEFB129Q9H1M3 183 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 KCNQ5Q9NR82 932 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 PIK3CDO00329 1044 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 ZBED6P86452 979 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 AOC3Q16853 763 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 KCNV1Q6PIU1 500 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 CEP112Q8N8E3 955 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 BCCIPQ9P287 314 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 TCHPQ9BT92 498 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 POLR3CQ9BUI4 534 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 SLU7O95391 586 aaKnown RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 SHMT1P34896 483 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 IFFO1Q0D2I5 559 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 PRKG1Q13976 671 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 USP17L2Q6R6M4 530 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 OTUD6AQ7L8S5 288 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 RAB3IL1Q8TBN0 382 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 FAM167AQ96KS9 214 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 CCDC42Q96M95 316 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 AIFM3Q96NN9 605 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 WDR18Q9BV38 432 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 TMEM206Q9H813 350 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 KCND1Q9NSA2 647 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 ARHGEF35A5YM69 484 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 GH2P01242 217 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 EEF2P13639 858 aaKnown RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 PRPF4BQ13523 1007 aaKnown RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 ZNF827Q17R98 1081 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 HERC4Q5GLZ8 1057 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-201ENST00000262539 SLC5A4Q9NY91 659 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 PCDHA6Q9UN73 950 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 PCDHA8Q9Y5H6 950 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
PTPN3-201ENST00000262539 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
PTPN3-201ENST00000262539 C21orf2O43822 256 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 MAP9Q49MG5 647 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 SULF1Q8IWU6 871 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 ADSSL1Q8N142 457 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 LRRC47Q8N1G4 583 aaKnown RBP9.08□□□□□ -0.96
PTPN3-201ENST00000262539 TNFRSF25Q93038 417 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 SLF1Q9BQI6 1058 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 TRIM9Q9C026 710 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 C17orf75Q9HAS0 396 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 JAG2Q9Y219 1238 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 TACC1O75410 805 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 ACTN2P35609 894 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 NAALADL2Q58DX5 795 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 NEK11Q8NG66 645 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 JMJD4Q9H9V9 463 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 ODF2LQ9ULJ1 636 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 CNPY4Q8N129 248 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 MCPH1Q8NEM0 835 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 MAD2L2Q9UI95 211 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 NDC80O14777 642 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 PAFAH1B1P43034 410 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 IREB2P48200 963 aaKnown RBP9.08□□□□□ -0.96
PTPN3-201ENST00000262539 MAN1B1Q9UKM7 699 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 IRS2Q9Y4H2 1338 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 TMCO5BA8MYB1 307 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 MYZAPP0CAP1 466 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 KLRK1P26718 216 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 SARSP49591 514 aaKnown RBP9.08□□□□□ -0.96
PTPN3-201ENST00000262539 KIF5AQ12840 1032 aa9.08□□□□□ -0.96
PTPN3-201ENST00000262539 GPKOWQ92917 476 aaPredicted RBP eCLIP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms