RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 LEO1Q8WVC0 666 aaPredicted RBP21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 SLC10A4Q96EP9 437 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 POLR3EQ9NVU0 708 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 TAL1P17542 331 aaPredicted RBP21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 KCNJ6P48051 423 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 TOB1P50616 345 aaPredicted RBP21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 PIK3AP1Q6ZUJ8 805 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 REXO1Q8N1G1 1221 aaKnown RBP21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 RIC8AQ9NPQ8 531 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 RTEL1Q9NZ71 1219 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 CLIC4Q9Y696 253 aa21.22■□□□□ 0.99
COL4A3BP-201ENST00000261415 CST9Q5W186 159 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 CATSPERGQ6ZRH7 1159 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 PROCA1Q8NCQ7 364 aaPredicted RBP21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 CUL5Q93034 780 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 GJA5P36382 358 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 CORO7P57737 925 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 TRAF1Q13077 416 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 TREML2Q5T2D2 321 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 ANO1Q5XXA6 986 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 SLC38A10Q9HBR0 1119 aa21.21■□□□□ 0.99
COL4A3BP-201ENST00000261415 USP17L15C9J2P7 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L13C9JLJ4 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L11C9JVI0 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L18D6R9N7 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L22D6RA61 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L17D6RBQ6 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L19D6RCP7 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L20D6RJB6 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L24Q0WX57 530 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 CAMK4Q16566 473 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 GADL1Q6ZQY3 521 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 EP400NLQ6ZTU2 488 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 PSTPIP2Q9H939 334 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 SUFUQ9UMX1 484 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 ZNF536O15090 1300 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 CCDC194A0A1B0GVG4 234 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 MAP2K2P36507 400 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 ZRSR1Q15695 479 aaKnown RBP21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 CC2D1AQ6P1N0 951 aaPredicted RBP21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 ANKRD20A12PQ8NF67 263 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 ATG4CQ96DT6 458 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 RCOR1Q9UKL0 485 aa21.2■□□□□ 0.98
COL4A3BP-201ENST00000261415 ICAM1P05362 532 aa21.19■□□□□ 0.98
COL4A3BP-201ENST00000261415 MRPL12P52815 198 aaKnown RBP21.19■□□□□ 0.98
COL4A3BP-201ENST00000261415 COG2Q14746 738 aa21.19■□□□□ 0.98
COL4A3BP-201ENST00000261415 SF3A1Q15459 793 aaKnown RBP21.19■□□□□ 0.98
COL4A3BP-201ENST00000261415 ARFGAP3Q9NP61 516 aa21.19■□□□□ 0.98
COL4A3BP-201ENST00000261415 BIN2Q9UBW5 565 aaPredicted RBP21.19■□□□□ 0.98
COL4A3BP-201ENST00000261415 VWA5AO00534 786 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 KIF3CO14782 793 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 CCP110O43303 1012 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 YEATS4O95619 227 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 FDX1P10109 184 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 DSG3P32926 999 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 EFCAB13Q8IY85 973 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 CKAP2LQ8IYA6 745 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 LINC00301Q8NCQ3 95 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 WNK4Q96J92 1243 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 GLT8D2Q9H1C3 349 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 CLSTN2Q9H4D0 955 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 TMEM260Q9NX78 707 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 PHLPP2Q6ZVD8 1323 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 NRDCO43847 1150 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 CLK2P49760 499 aaKnown RBP21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 UBE2SQ16763 222 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 JAKMIP3Q5VZ66 844 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 KRT25Q7Z3Z0 450 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 EGFL6Q8IUX8 553 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 ADAMTS5Q9UNA0 930 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 PCDHB6Q9Y5E3 794 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 MYPNQ86TC9 1320 aa21.18■□□□□ 0.98
COL4A3BP-201ENST00000261415 OPLAHO14841 1288 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 SASH3O75995 380 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 ARID5BQ14865 1188 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 STK38Q15208 465 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 GPR161Q8N6U8 529 aaKnown RBP21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 AGBL1Q96MI9 1066 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 IMPACTQ9P2X3 320 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 CCPG1Q9ULG6 757 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 GOLGA6L4A6NEF3 574 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 ZBED4O75132 1171 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 TRAPPC10P48553 1259 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 MOGSQ13724 837 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 CPXCR1Q8N123 301 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 DACT1Q9NYF0 836 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 ABCB11O95342 1321 aa21.17■□□□□ 0.98
COL4A3BP-201ENST00000261415 WNT7AO00755 349 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 TADA3O75528 432 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 SEC31AO94979 1220 aaKnown RBP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 LIG1P18858 919 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 HOXA7P31268 230 aaPredicted RBP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 SNAPC2Q13487 334 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 NONOQ15233 471 aaKnown RBP eCLIP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 PTPAQ15257 358 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 LRRN4CLQ8ND94 238 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 PPP1R13BQ96KQ4 1090 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 RAVER2Q9HCJ3 691 aaKnown RBP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 PASKQ96RG2 1323 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms