RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 BLOC1S2Q6QNY1 142 aa6.58□□□□□ -1.36
TOPBP1-201ENST00000260810 TEX11Q8IYF3 940 aa6.58□□□□□ -1.36
TOPBP1-201ENST00000260810 CYP39A1Q9NYL5 469 aa6.58□□□□□ -1.36
TOPBP1-201ENST00000260810 GNEQ9Y223 722 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-201ENST00000260810 BCS1LQ9Y276 419 aa6.58□□□□□ -1.36
TOPBP1-201ENST00000260810 FLNCQ14315 2725 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 HOXA7P31268 230 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 MCM5P33992 734 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 ST5P78524 1137 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 CCZ1BP86790 482 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 CCZ1P86791 482 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 SYDE2Q5VT97 1194 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 TMEM192Q8IY95 271 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 PDE4DIPQ5VU43 2346 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 KLRF2D3W0D1 207 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 MORN1Q5T089 497 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 LHX8Q68G74 356 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 C16orf70Q9BSU1 422 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 TMEM88BA6NKF7 163 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 CCDC158Q5M9N0 1113 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 TTI2Q6NXR4 508 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 TMED8Q6PL24 325 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 DIS3L2Q8IYB7 885 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF516Q92618 1163 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 CSRNP1Q96S65 589 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 ESYT2A0FGR8 921 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 BTBD19C9JJ37 291 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 TRIM65Q6PJ69 517 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 C17orf99Q6UX52 265 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 RPGRQ92834 1020 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 COPS5Q92905 334 aa6.57□□□□□ -1.36
TOPBP1-201ENST00000260810 TRAK2O60296 914 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF792Q3KQV3 632 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 HGSNATQ68CP4 663 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 MICALCLQ6ZW33 695 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 CATSPER3Q86XQ3 398 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 NCOA7Q8NI08 942 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 SYTL5Q8TDW5 730 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 LRP2BPQ9P2M1 347 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 UBIAD1Q9Y5Z9 338 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 TCF20Q9UGU0 1960 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 TRIM49BA6NDI0 452 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 SPDYE5A6NIY4 337 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 MARCKSP29966 332 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF131P52739 623 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 NKX3-2P78367 333 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 PNOCQ13519 176 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 MAP3K21Q5TCX8 1036 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 RBM46Q8TBY0 533 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 ZNF419Q96HQ0 510 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 VCPKMTQ9H867 229 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 WDR33Q9C0J8 1336 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 SREBF1P36956 1147 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 LRMPQ12912 555 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 PTGDRQ13258 359 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 INPP4AQ96PE3 977 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 ARHGAP28Q9P2N2 729 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 CLIP2Q9UDT6 1046 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 GDAQ9Y2T3 454 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 TRIOBPQ9H2D6 2365 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 IGKV6-21A0A0C4DH24 114 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 KIF4BQ2VIQ3 1234 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 TMEM87BQ96K49 555 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 GABRQQ9UN88 632 aa6.56□□□□□ -1.36
TOPBP1-201ENST00000260810 GOLGA8BA8MQT2 603 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 CALCAP01258 141 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 PGFP49763 221 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 FOSBP53539 338 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 C1orf186Q6ZWK4 172 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 RASAL3Q86YV0 1011 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 TAAR1Q96RJ0 339 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 DNAJC25Q9H1X3 360 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 A0A0G2JS52 829 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 TTF1Q15361 905 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 DACT1Q9NYF0 836 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 PYCARDQ9ULZ3 195 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 PCDHA5Q9Y5H7 936 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 CYP46A1Q9Y6A2 500 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 SCG2P13521 617 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 BACE1P56817 501 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 NAA30Q147X3 362 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 RAB6CQ53S08 254 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 CYP4V2Q6ZWL3 525 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 TMC4Q7Z404 712 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 LUZP1Q86V48 1076 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 LINC01599Q8WXQ3 324 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 TEKT1Q969V4 418 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 RAB6CQ9H0N0 254 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 RGL1Q9NZL6 768 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 SRPRBQ9Y5M8 271 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 F8W810 466 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 SPNS2Q8IVW8 549 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 RUSC1Q9BVN2 902 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 FOXP1Q9H334 677 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 DMAC2Q9NW81 257 aa6.55□□□□□ -1.36
TOPBP1-201ENST00000260810 PI4KBQ9UBF8 816 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms