RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 GNAQP50148 359 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 GPSM2P81274 684 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 NOA1Q8NC60 698 aaKnown RBP12.53□□□□□ -0.4
PDE6B-201ENST00000255622 DAGLBQ8NCG7 672 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 KAT2BQ92831 832 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 EPN1Q9Y6I3 576 aaPredicted RBP12.53□□□□□ -0.4
PDE6B-201ENST00000255622 MYH1P12882 1939 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
PDE6B-201ENST00000255622 BTAF1O14981 1849 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 CLEC10AQ8IUN9 316 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 KIAA0825Q8IV33 1275 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 CSGALNACT2Q8N6G5 542 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 PIGSQ96S52 555 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
PDE6B-201ENST00000255622 A0A087WUV0 522 aaPredicted RBP12.52□□□□□ -0.4
PDE6B-201ENST00000255622 RASSF10A6NK89 507 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 PSMA7O14818 248 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 OR52Z1P0C646 297 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 RFC4P35249 363 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 HERVK_113P62684 666 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 PDE4DQ08499 809 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 TRIM14Q14142 442 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 KCNB1Q14721 858 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.4
PDE6B-201ENST00000255622 NGLY1Q96IV0 654 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 BLOC1S6Q9UL45 172 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.4
PDE6B-201ENST00000255622 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.4
PDE6B-201ENST00000255622 H3BQF6 201 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
PDE6B-201ENST00000255622 ASIC1P78348 528 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 CEP112Q8N8E3 955 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 OR8K1Q8NGG5 319 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 TUBGCP2Q9BSJ2 902 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 TRIM9Q9C026 710 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 TCP11L1Q9NUJ3 509 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 CDK5RAP2Q96SN8 1893 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 C21orf2O43822 256 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 SRGAP2O75044 1071 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 UFL1O94874 794 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 MCM6Q14566 821 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 ARMC9Q7Z3E5 817 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 BICD1Q96G01 975 aa12.52□□□□□ -0.41
PDE6B-201ENST00000255622 MMTAG2Q9BU76 263 aaKnown RBP12.52□□□□□ -0.41
PDE6B-201ENST00000255622 CCDC151A5D8V7 595 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 RCCD1A6NED2 376 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 EEF1GP26641 437 aaKnown RBP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 PPP4CP60510 307 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 VSNL1P62760 191 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 GSTO1P78417 241 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 PDCD2Q16342 344 aaPredicted RBP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 THAP9Q9H5L6 903 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 VPS18Q9P253 973 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 MAGEC2Q9UBF1 373 aaPredicted RBP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 LEMD3Q9Y2U8 911 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 PYGBP11216 843 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 TRIM21P19474 475 aaKnown RBP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 TXKP42681 527 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 AMPD2Q01433 879 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 STIM1Q13586 685 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 DBN1Q16643 649 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 C16orf86Q6ZW13 317 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
PDE6B-201ENST00000255622 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 ABCB6Q9NP58 842 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 EXOC1Q9NV70 894 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 CAPN11Q9UMQ6 739 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 DUSP10Q9Y6W6 482 aa12.51□□□□□ -0.41
PDE6B-201ENST00000255622 ATP1A1P05023 1023 aaKnown RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 MAGEA8P43361 318 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 KIAA0895Q8NCT3 520 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 EXOC4Q96A65 974 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CD248Q9HCU0 757 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 MYO6Q9UM54 1294 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 PRPHP41219 470 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 GRIK3Q13003 919 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 C16orf87Q6PH81 154 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 NEK8Q86SG6 692 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms