RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 MB21D1Q8N884 522 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 CRAMP1Q96RY5 1269 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 ARHGAP20Q9P2F6 1191 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 RSPH14Q9UHP6 348 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 ATP6V0A2Q9Y487 856 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 KCNJ18B7U540 433 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 UFL1O94874 794 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 LCA5LO95447 670 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 KCNJ12Q14500 433 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 HYIQ5T013 277 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
RPA1-201ENST00000254719 ESYT2A0FGR8 921 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 PSMA7O14818 248 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 PHACTR2O75167 634 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 SMARCA1P28370 1054 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 TRIM14Q14142 442 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 ETNPPLQ8TBG4 499 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 NUP88Q99567 741 aaPredicted RBP10.25□□□□□ -0.77
RPA1-201ENST00000254719 KCTD10Q9H3F6 313 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 KCNMB3Q9NPA1 279 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 CNTNAP1P78357 1384 aa10.25□□□□□ -0.77
RPA1-201ENST00000254719 N4BP3O15049 544 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 SPATA31C1P0DKV0 1188 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 KCNA3P22001 575 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 HNRNPH3P31942 346 aaKnown RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 PSMC6P62333 389 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 CC2D1AQ6P1N0 951 aaPredicted RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 TANGO6Q9C0B7 1094 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 BIN2Q9UBW5 565 aaPredicted RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 CCDC175P0C221 793 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 FXR2P51116 673 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■□□□ 12.2
RPA1-201ENST00000254719 UBE2SQ16763 222 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 LRRC47Q8N1G4 583 aaKnown RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 CYP2W1Q8TAV3 490 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 CAPN11Q9UMQ6 739 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 LGALS16A8MUM7 142 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 UBAP1LF5GYI3 381 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 RDXP35241 583 aaKnown RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 CYLC1P35663 651 aaPredicted RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 TECP42680 631 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 VPS36Q86VN1 386 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 NAP1L4Q99733 375 aaKnown RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 PARD6BQ9BYG5 372 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 TMOD2Q9NZR1 351 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 N4BP1O75113 896 aaKnown RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 TRIM37O94972 964 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 GNG11P61952 73 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 CKAP4Q07065 602 aaKnown RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 RAD51AP2Q09MP3 1159 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 ZNF662Q6ZS27 426 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 CNGA4Q8IV77 575 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 SP8Q8IXZ3 490 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 CEP112Q8N8E3 955 aa10.24□□□□□ -0.77
RPA1-201ENST00000254719 RGS17Q9UGC6 210 aaPredicted RBP10.24□□□□□ -0.77
RPA1-201ENST00000254719 ZMYM2Q9UBW7 1377 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 BICDL2A1A5D9 508 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 AKR1B15C9JRZ8 316 aaPredicted RBP10.23□□□□□ -0.77
RPA1-201ENST00000254719 RFC4P35249 363 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 SLC16A2P36021 539 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 ZNF804AQ7Z570 1209 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 MSANTD4Q8NCY6 345 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 TAF4BQ92750 862 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 EHMT1Q9H9B1 1298 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 SMCO2A6NFE2 343 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 RBAK-RBAKDNI3L0D1 243 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 GNA11P29992 359 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 PAFAH1B1P43034 410 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 EIF6P56537 245 aaKnown RBP10.23□□□□□ -0.77
RPA1-201ENST00000254719 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 PTPRFP10586 1907 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 GOLGA6L10A6NI86 522 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 B4DLN1 442 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
RPA1-201ENST00000254719 GTF2IP78347 998 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 KRT26Q7Z3Y9 468 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 MKL1Q969V6 931 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 C6orf50Q9HD87 102 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 LZTFL1Q9NQ48 299 aa10.23□□□□□ -0.77
RPA1-201ENST00000254719 FAM86B1E9PN63 330 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 SRGAP2O75044 1071 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 HLA-DOAP06340 250 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 FAM86B2P0C5J1 330 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 STAT6P42226 847 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 MTIF2P46199 727 aaKnown RBP10.22□□□□□ -0.77
RPA1-201ENST00000254719 HEATR3Q7Z4Q2 680 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 SLC35F6Q8N357 371 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 GPATCH11Q8N954 259 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 UIMC1Q96RL1 719 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 LZTS2Q9BRK4 669 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 TOM1O60784 492 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 ATP1A1P05023 1023 aaKnown RBP10.22□□□□□ -0.77
RPA1-201ENST00000254719 MMP14P50281 582 aa10.22□□□□□ -0.77
RPA1-201ENST00000254719 SCNN1DP51172 638 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms