RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RYBPQ8N488 228 aaPredicted RBP20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 ACRBPQ8NEB7 543 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 GRK7Q8WTQ7 553 aa20.37■□□□□ 0.85
SMARCC1-201ENST00000254480 FTCDO95954 541 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 GPATCH4Q5T3I0 446 aaKnown RBP20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 PPP1R13BQ96KQ4 1090 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 STAP2Q9UGK3 403 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 TROVE2P10155 538 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 TRIP13Q15645 432 aaPredicted RBP20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 RNF26Q9BY78 433 aaPredicted RBP20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 PLEKHA8P1O95397 391 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 MFAP3P55082 362 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 KIF23Q02241 960 aaPredicted RBP20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 SRGAP2CP0DJJ0 459 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 CYP2D6P10635 497 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 CCNYQ8ND76 341 aa20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.36■□□□□ 0.85
SMARCC1-201ENST00000254480 MYO1FO00160 1098 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 FOSP01100 380 aaPredicted RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 ECE1P42892 770 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 CC2D2BQ6DHV5 1058 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 LMNTD2Q8IXW0 634 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 P2RX5Q93086 422 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 MAGOHBQ96A72 148 aaKnown RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 ETF1P62495 437 aaKnown RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 C2orf54Q08AI8 447 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 HAUS2Q9NVX0 235 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 PSMC2P35998 433 aaKnown RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 RBBP5Q15291 538 aaKnown RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 LRRC43Q8N309 656 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 UBE2TQ9NPD8 197 aaPredicted RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 ABCF3Q9NUQ8 709 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 SH2B2O14492 632 aaPredicted RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 C21orf2O43822 256 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 MOCS3O95396 460 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 MMP1P03956 469 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 PLCB4Q15147 1175 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 CCDC17Q96LX7 622 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 HAUS4Q9H6D7 363 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 IGSF1Q8N6C5 1336 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 SOWAHDA6NJG2 315 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 TRIM68Q6AZZ1 485 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 MYLK4Q86YV6 388 aaPredicted RBP20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 KIF9Q9HAQ2 790 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
SMARCC1-201ENST00000254480 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 ANKRD36BP1Q96IX9 119 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 SASH1O94885 1247 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 MRPS25P82663 173 aaKnown RBP20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 AFPP02771 609 aaKnown RBP20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 RXRBP28702 533 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 MAPK4P31152 587 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 RNASELQ05823 741 aaKnown RBP20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 RAPH1Q70E73 1250 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 CROCCP2Q86T23 111 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 MIPOL1Q8TD10 442 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 ATP6V0A1Q93050 837 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 PDE11AQ9HCR9 933 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 FIS1Q9Y3D6 152 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 CASQ2O14958 399 aaPredicted RBP20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 CYP4F22Q6NT55 531 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 TFDP1Q14186 410 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 MIS18BP1Q6P0N0 1132 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
SMARCC1-201ENST00000254480 PLCG1P19174 1290 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 CASP2P42575 452 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 CAPN7Q9Y6W3 813 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 CDC37Q16543 378 aaPredicted RBP20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 IQCDQ96DY2 449 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 ZBTB24O43167 697 aaPredicted RBP20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 SH3RF3Q8TEJ3 882 aaPredicted RBP20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 HAUS1Q96CS2 278 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 HDAC11Q96DB2 347 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 GCNT4Q9P109 453 aa20.33■□□□□ 0.85
SMARCC1-201ENST00000254480 H0YCG3 227 aa20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 PPP6R2O75170 966 aa20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 RINT1Q6NUQ1 792 aa20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 CCDC68Q9H2F9 335 aa20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 TCP1P17987 556 aaKnown RBP20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 AP5M1Q9H0R1 490 aa20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 KLHL14Q9P2G3 628 aa20.33■□□□□ 0.84
SMARCC1-201ENST00000254480 WDR17Q8IZU2 1322 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 ARHGAP24Q8N264 748 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 ACTN1P12814 892 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 CASP1P29466 404 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 CDK8P49336 464 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 BRD3Q15059 726 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 NLRP4Q96MN2 994 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 SLC12A1Q13621 1099 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 SIRT2Q8IXJ6 389 aa20.32■□□□□ 0.84
SMARCC1-201ENST00000254480 OSBPP22059 807 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms