RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GLT1D1Q96MS3 346 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 MCM3APO60318 1980 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 TLE2Q04725 743 aa20.65■□□□□ 0.9
SNRPA1-201ENST00000254193 PFKFB3Q16875 520 aaPredicted RBP20.65■□□□□ 0.9
SNRPA1-201ENST00000254193 C1orf53Q5VUE5 145 aa20.65■□□□□ 0.9
SNRPA1-201ENST00000254193 BARHL2Q9NY43 387 aa20.65■□□□□ 0.9
SNRPA1-201ENST00000254193 DDX41Q9UJV9 622 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-201ENST00000254193 MRVI1Q9Y6F6 885 aa20.65■□□□□ 0.9
SNRPA1-201ENST00000254193 FRMPD3Q5JV73 1810 aa20.64■□□□□ 0.9
SNRPA1-201ENST00000254193 ELP1O95163 1332 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 FRMPD4Q14CM0 1322 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 PRPF3O43395 683 aaKnown RBP20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 ZEB2O60315 1214 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 SCG2P13521 617 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 MRPS9P82933 396 aaKnown RBP20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 PKN1Q16512 942 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 PPP1R18Q6NYC8 613 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 SLC26A6Q9BXS9 759 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 RIC8AQ9NPQ8 531 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 LRRC37A2A6NM11 1700 aa20.64■□□□□ 0.89
SNRPA1-201ENST00000254193 SMCO2A6NFE2 343 aa20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 hCG_1984214I3L0E3 225 aa20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 PQBP1O60828 265 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 IFNAR1P17181 557 aa20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 AKAP17AQ02040 695 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 CHRDL2Q6WN34 429 aa20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 ZNF713Q8N859 430 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 ALDH8A1Q9H2A2 487 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 RTEL1Q9NZ71 1219 aa20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 TPCN1Q9ULQ1 816 aa20.63■□□□□ 0.89
SNRPA1-201ENST00000254193 A6NJR5 290 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 GH1P01241 217 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 MYL3P08590 195 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 CPT1AP50416 773 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 ADCY7P51828 1080 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 AK2P54819 239 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 PSMC6P62333 389 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 ARHGAP1Q07960 439 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 AFG1LQ8WV93 481 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 RNF26Q9BY78 433 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 PCDHA6Q9UN73 950 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 COLQQ9Y215 455 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 PCDHA8Q9Y5H6 950 aa20.62■□□□□ 0.89
SNRPA1-201ENST00000254193 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 SPDYE3A6NKU9 549 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 CPLX1O14810 134 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 SORBS3O60504 671 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 CABYRO75952 493 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 NEK4P51957 841 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 SP2Q02086 613 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 PCNX4Q63HM2 1172 aa20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 PRDM5Q9NQX1 630 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-201ENST00000254193 GRIN2DO15399 1336 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 ARVCFO00192 962 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 CDK7P50613 346 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 PURAQ00577 322 aaKnown RBP20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 ANKRD1Q15327 319 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 BRDTQ58F21 947 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 XRRA1Q6P2D8 792 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 ANKRD33Q7Z3H0 272 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 SH3RF1Q7Z6J0 888 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 PGBD1Q96JS3 809 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 INPP4AQ96PE3 977 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 SLKQ9H2G2 1235 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 PDLIM7Q9NR12 457 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 POLR3EQ9NVU0 708 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 TMEM260Q9NX78 707 aa20.6■□□□□ 0.89
SNRPA1-201ENST00000254193 CEP290O15078 2479 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 SPATA31C2B4DYI2 1134 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 ADAMTS3O15072 1205 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 STAM2O75886 525 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 UBA1P22314 1058 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 MAGEA10P43363 369 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 SSRP1Q08945 709 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 SCRN1Q12765 414 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 ITGA7Q13683 1181 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 GNPTABQ3T906 1256 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 KCNV1Q6PIU1 500 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 DHX37Q8IY37 1157 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 PRKAG2Q9UGJ0 569 aa20.59■□□□□ 0.89
SNRPA1-201ENST00000254193 TRIM43BA6NCK2 446 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 DCDC2CA8MYV0 355 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 PFKFB2O60825 505 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 DTNBO60941 627 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 GGPS1O95749 300 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 CLTBP09497 229 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 TGFB3P10600 412 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 MDM2Q00987 491 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 FAAP100Q0VG06 881 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 SEMA3FQ13275 785 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 LAMC2Q13753 1193 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 CELF3Q5SZQ8 465 aaKnown RBP20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 CPLX2Q6PUV4 134 aaKnown RBP20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 TRIM22Q8IYM9 498 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 SLC43A3Q8NBI5 491 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 EMID1Q96A84 441 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 TRIM43Q96BQ3 446 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 TOX2Q96NM4 488 aa20.58■□□□□ 0.89
SNRPA1-201ENST00000254193 GDF15Q99988 308 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms