RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 DDX12PQ92771 950 aa28.12■■■□□ 2.09
TMEM55B-201ENST00000250489 CNOT6LQ96LI5 555 aaKnown RBP28.12■■■□□ 2.09
TMEM55B-201ENST00000250489 KRT9P35527 623 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 ERVK-24P63145 666 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 EHHADHQ08426 723 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 DLGAP5Q15398 846 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 FAM151AQ8WW52 585 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 WDR24Q96S15 920 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 HDAC9Q9UKV0 1011 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 PRKCSHP14314 528 aaPredicted RBP28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 HOXA7P31268 230 aaPredicted RBP28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 ARHGAP4P98171 946 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 USH1GQ495M9 461 aa28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 ZNF277Q9NRM2 450 aaPredicted RBP28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 V9GYY5 206 aaPredicted RBP28.11■■■□□ 2.09
TMEM55B-201ENST00000250489 B4DLN1 442 aa28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 PES1O00541 588 aaKnown RBP28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 GUF1Q8N442 669 aaKnown RBP28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 NT5C3AQ9H0P0 336 aa28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 CNTNAP1P78357 1384 aa28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 SLC26A4O43511 780 aa28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 CYP26C1Q6V0L0 522 aa28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 EEF2KMTQ96G04 330 aa28.1■■■□□ 2.09
TMEM55B-201ENST00000250489 TTC26A0AVF1 554 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 URI1O94763 535 aaPredicted RBP28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 IDEP14735 1019 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 KCNA3P22001 575 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 CASQ1P31415 396 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 PSMD2Q13200 908 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 SPDYE2Q495Y8 402 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 SLFN12Q8IYM2 578 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 DNAJC19Q96DA6 116 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 ARHGEF10LQ9HCE6 1279 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 PRR12Q9ULL5 1215 aa28.09■■■□□ 2.09
TMEM55B-201ENST00000250489 FOSP01100 380 aaPredicted RBP28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 DPEP1P16444 411 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 ECE1P42892 770 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 SPICE1Q8N0Z3 855 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 LRRN4CLQ8ND94 238 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 KIFC2Q96AC6 838 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 UIMC1Q96RL1 719 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 CGNQ9P2M7 1197 aaKnown RBP28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 MTIF2P46199 727 aaKnown RBP28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 OGFOD1Q8N543 542 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 CAPN11Q9UMQ6 739 aa28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 ZBTB12Q9Y330 459 aaPredicted RBP28.08■■■□□ 2.09
TMEM55B-201ENST00000250489 OPLAHO14841 1288 aa28.07■■■□□ 2.08
TMEM55B-201ENST00000250489 TAL1P17542 331 aaPredicted RBP28.07■■■□□ 2.08
TMEM55B-201ENST00000250489 SREBF1P36956 1147 aa28.07■■■□□ 2.08
TMEM55B-201ENST00000250489 ELF2Q15723 593 aa28.07■■■□□ 2.08
TMEM55B-201ENST00000250489 Q4G0T1 1027 aa28.07■■■□□ 2.08
TMEM55B-201ENST00000250489 ETNPPLQ8TBG4 499 aa28.07■■■□□ 2.08
TMEM55B-201ENST00000250489 SPDYE3A6NKU9 549 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 MIIPQ5JXC2 388 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 ACER1Q8TDN7 264 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 DNAJC7Q99615 494 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 CCDC94Q9BW85 323 aaPredicted RBP28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 LZTFL1Q9NQ48 299 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 KIAA1024Q9UPX6 916 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 TMX2Q9Y320 296 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 LUC7L2Q9Y383 392 aaKnown RBP28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 A0A0U1RQJ8 604 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 TBX3O15119 743 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 KIAA1755Q5JYT7 1200 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 OR8K1Q8NGG5 319 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 ATRIPQ8WXE1 791 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 ZBTB21Q9ULJ3 1066 aa28.06■■■□□ 2.08
TMEM55B-201ENST00000250489 POTEB3A0JP26 581 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 POTECB2RU33 542 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 E9PMD0 336 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 STAT3P40763 770 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 TBC1D8BQ0IIM8 1120 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 COASYQ13057 564 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 PRR16Q569H4 304 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 POTEBQ6S5H4 581 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 ACRBPQ8NEB7 543 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 FBXO41Q8TF61 875 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 LENG9Q96B70 501 aa28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 NOC4LQ9BVI4 516 aaKnown RBP28.05■■■□□ 2.08
TMEM55B-201ENST00000250489 STAT2P52630 851 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 LRRC63Q05C16 580 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 SPIRE1Q08AE8 756 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 TTYH3Q9C0H2 523 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 VPS33BQ9H267 617 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 PLA2G4BP0C869 781 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 FKBP1CQ5VVH2 108 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 ARID3AQ99856 593 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 NUP58Q9BVL2 599 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 IRX2Q9BZI1 471 aaPredicted RBP28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 GOPCQ9HD26 462 aa28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 BMP2KQ9NSY1 1161 aaPredicted RBP28.04■■■□□ 2.08
TMEM55B-201ENST00000250489 RASSF10A6NK89 507 aa28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 NKRFO15226 690 aaKnown RBP eCLIP28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 MED24O75448 989 aa28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 SSBP05455 408 aaKnown RBP eCLIP28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 CIITAP33076 1130 aa28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 MAP3K9P80192 1104 aa28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 FOXR2Q6PJQ5 311 aa28.03■■■□□ 2.08
TMEM55B-201ENST00000250489 RETREG2Q8NC44 543 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms