RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 DAPK3O43293 454 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 TTC38Q5R3I4 469 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 B4GALNT2Q8NHY0 566 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 ECT2Q9H8V3 914 aa20.1■□□□□ 0.81
PTPN12-201ENST00000248594 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
PTPN12-201ENST00000248594 SPDYE5A6NIY4 337 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 ERVK-9P63128 1117 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 ZNF658Q5TYW1 1059 aaPredicted RBP20.09■□□□□ 0.81
PTPN12-201ENST00000248594 CCDC155Q8N6L0 562 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 MTRQ99707 1265 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 DPPA5A6NC42 116 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 LINGO3P0C6S8 592 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 CHN1P15882 459 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 ANKRD20A2Q5SQ80 823 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 ANKRD20A1Q5TYW2 823 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 ANKRD20A3Q5VUR7 823 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 ZFATQ9P243 1243 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 RNASELQ05823 741 aaKnown RBP20.09■□□□□ 0.81
PTPN12-201ENST00000248594 LPIN2Q92539 896 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 FOXP1Q9H334 677 aaPredicted RBP20.09■□□□□ 0.81
PTPN12-201ENST00000248594 KANSL2Q9H9L4 492 aa20.09■□□□□ 0.81
PTPN12-201ENST00000248594 LRRD1A4D1F6 860 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 ATP4AP20648 1035 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 DRD4P21917 467 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 TNNC1P63316 161 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 IGDCC4Q8TDY8 1250 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 TEKT4Q8WW24 435 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 MYH15Q9Y2K3 1946 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 LRRC10BA6NIK2 292 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 F8W031 263 aaPredicted RBP20.08■□□□□ 0.81
PTPN12-201ENST00000248594 WHAMMQ8TF30 809 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 XPO6Q96QU8 1125 aaKnown RBP20.08■□□□□ 0.81
PTPN12-201ENST00000248594 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
PTPN12-201ENST00000248594 CPDO75976 1380 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 RFX7Q2KHR2 1363 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 LRRC53A6NM62 1247 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 DEXIO95424 95 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 XBP1P17861 261 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 IL15P40933 162 aaPredicted RBP20.08■□□□□ 0.8
PTPN12-201ENST00000248594 ZNF579Q8NAF0 562 aaKnown RBP20.08■□□□□ 0.8
PTPN12-201ENST00000248594 RETREG2Q8NC44 543 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 PRMT1Q99873 361 aaKnown RBP20.08■□□□□ 0.8
PTPN12-201ENST00000248594 NEUROG2Q9H2A3 272 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 SLC12A6Q9UHW9 1150 aa20.08■□□□□ 0.8
PTPN12-201ENST00000248594 PPIP5K2O43314 1243 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 GTPBP6O43824 516 aaPredicted RBP20.07■□□□□ 0.8
PTPN12-201ENST00000248594 KRT2P35908 639 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 KLHDC7AQ5VTJ3 777 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 CELF4Q9BZC1 486 aaKnown RBP20.07■□□□□ 0.8
PTPN12-201ENST00000248594 TRIM4Q9C037 500 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 LACTBP83111 547 aaPredicted RBP20.07■□□□□ 0.8
PTPN12-201ENST00000248594 UAP1Q16222 522 aaPredicted RBP20.07■□□□□ 0.8
PTPN12-201ENST00000248594 OTUD6AQ7L8S5 288 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 LRRC45Q96CN5 670 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 EBF2Q9HAK2 575 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 AMACRQ9UHK6 382 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 EYA2O00167 538 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 MAP3K13O43283 966 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 DNAJC8O75937 253 aaPredicted RBP20.07■□□□□ 0.8
PTPN12-201ENST00000248594 IFNAR1P17181 557 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 IGHMBP2P38935 993 aaKnown RBP20.07■□□□□ 0.8
PTPN12-201ENST00000248594 ABL2P42684 1182 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 ATP11AP98196 1134 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 TRPM8Q7Z2W7 1104 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 TMEM165Q9HC07 324 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 GDF3Q9NR23 364 aa20.07■□□□□ 0.8
PTPN12-201ENST00000248594 NBPF5PQ86XG9 351 aaPredicted RBP20.06■□□□□ 0.8
PTPN12-201ENST00000248594 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
PTPN12-201ENST00000248594 ACSBG1Q96GR2 724 aa20.06■□□□□ 0.8
PTPN12-201ENST00000248594 PSMD1Q99460 953 aa20.06■□□□□ 0.8
PTPN12-201ENST00000248594 ATP2A2P16615 1042 aaKnown RBP20.06■□□□□ 0.8
PTPN12-201ENST00000248594 CCDC57Q2TAC2 916 aa20.06■□□□□ 0.8
PTPN12-201ENST00000248594 MFSD6Q6ZSS7 791 aa20.06■□□□□ 0.8
PTPN12-201ENST00000248594 PAGR1Q9BTK6 254 aa20.06■□□□□ 0.8
PTPN12-201ENST00000248594 RMND1Q9NWS8 449 aa20.06■□□□□ 0.8
PTPN12-201ENST00000248594 KRT16P08779 473 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 NQO1P15559 274 aaKnown RBP20.05■□□□□ 0.8
PTPN12-201ENST00000248594 CABP4P57796 275 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 ANKRD42Q8N9B4 389 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 MAGEC3Q8TD91 643 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 RASGRP4Q8TDF6 673 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 BORCS6Q96GS4 357 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.05■□□□□ 0.88e-7■■■□□ 14.6
PTPN12-201ENST00000248594 ARMT1Q9H993 441 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 INTS9Q9NV88 658 aaKnown RBP20.05■□□□□ 0.8
PTPN12-201ENST00000248594 PNMA3Q9UL41 463 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
PTPN12-201ENST00000248594 CRYBG1Q9Y4K1 1723 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 hCG_2014768A0A024R1R8 64 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 PRKAB2O43741 272 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
PTPN12-201ENST00000248594 ICA1Q05084 483 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 CRACR2BQ8N4Y2 399 aaPredicted RBP20.05■□□□□ 0.8
PTPN12-201ENST00000248594 TMEM87BQ96K49 555 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 COPB2P35606 906 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 TUBP50607 506 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 ASIC1P78348 528 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 PDE4DQ08499 809 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms