RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 MYH1P12882 1939 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 SSU72P8A0A1W2PR75 194 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 LSP1P33241 339 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
DDX55-201ENST00000238146 NAP1L1P55209 391 aaKnown RBP17.15■□□□□ 0.34
DDX55-201ENST00000238146 EMC10Q5UCC4 262 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
DDX55-201ENST00000238146 NCAPGQ9BPX3 1015 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 ABCB11O95342 1321 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 FNTAP49354 379 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 GUCY1A3Q02108 690 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 APBA1Q02410 837 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 PAK2Q13177 524 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 PRPF38AQ8NAV1 312 aaKnown RBP17.15■□□□□ 0.34
DDX55-201ENST00000238146 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 ZMYND12Q9H0C1 365 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 CAPN7Q9Y6W3 813 aa17.15■□□□□ 0.34
DDX55-201ENST00000238146 MYMKA6NI61 221 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 MEFVO15553 781 aaPredicted RBP17.14■□□□□ 0.34
DDX55-201ENST00000238146 NONOQ15233 471 aaKnown RBP eCLIP17.14■□□□□ 0.34
DDX55-201ENST00000238146 SV2BQ7L1I2 683 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 KRT25Q7Z3Z0 450 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 MREGQ8N565 214 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 CALML4Q96GE6 196 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 EPN3Q9H201 632 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 BLOC1S4Q9NUP1 217 aa17.14■□□□□ 0.34
DDX55-201ENST00000238146 LAMB1P07942 1786 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 RBAK-RBAKDNI3L0D1 243 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 KCNMA1Q12791 1236 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
DDX55-201ENST00000238146 LRRC55Q6ZSA7 311 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 UNC13DQ70J99 1090 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 CD302Q8IX05 232 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
DDX55-201ENST00000238146 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
DDX55-201ENST00000238146 ZPR1O75312 459 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 MNAT1P51948 309 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 GRB10Q13322 594 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 C12orf60Q5U649 245 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 NAA35Q5VZE5 725 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 SPATS2Q86XZ4 545 aaKnown RBP17.14■□□□□ 0.33
DDX55-201ENST00000238146 EDEM3Q9BZQ6 932 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 CPVLQ9H3G5 476 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
DDX55-201ENST00000238146 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 PVALEFA0A1B0GWK0 134 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 PALMO75781 387 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 KIAA0754O94854 1291 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 CLSTN1O94985 981 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 FGFR1OPO95684 399 aaKnown RBP17.13■□□□□ 0.33
DDX55-201ENST00000238146 NR1D1P20393 614 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 DNA2P51530 1060 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 TRADDQ15628 312 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 NEK8Q86SG6 692 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 CASKIN2Q8WXE0 1202 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 TLR2O60603 784 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 FSBPO95073 299 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 NAPAP54920 295 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 KRT12Q99456 494 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 PAGR1Q9BTK6 254 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 NLRC4Q9NPP4 1024 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
DDX55-201ENST00000238146 PPP1R37O75864 691 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 FTCDO95954 541 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 TAF1P21675 1872 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 MYO1FO00160 1098 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 USP8P40818 1118 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 TXKP42681 527 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
DDX55-201ENST00000238146 PTGISQ16647 500 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 SLC9C1Q4G0N8 1177 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
DDX55-201ENST00000238146 ATP6V1G3Q96LB4 118 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 PNMA5Q96PV4 448 aa17.12■□□□□ 0.33
DDX55-201ENST00000238146 MYCBPQ99417 103 aaPredicted RBP17.12■□□□□ 0.33
DDX55-201ENST00000238146 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 KLRC1P26715 233 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 NAB2Q15742 525 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
DDX55-201ENST00000238146 GLIS3Q8NEA6 775 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
DDX55-201ENST00000238146 ZNF473Q8WTR7 871 aaKnown RBP17.11■□□□□ 0.33
DDX55-201ENST00000238146 LARP4BQ92615 738 aaKnown RBP17.11■□□□□ 0.33
DDX55-201ENST00000238146 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
DDX55-201ENST00000238146 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms