RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 TRIM49BA6NDI0 452 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 MYMKA6NI61 221 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 ASIC1P78348 528 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 MCM6Q14566 821 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 KRT31Q15323 416 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 TPD52L1Q16890 204 aaPredicted RBP17.89■□□□□ 0.45
ITGA4-201ENST00000233573 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
ITGA4-201ENST00000233573 TEX2Q8IWB9 1127 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
ITGA4-201ENST00000233573 LENG9Q96B70 501 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 FEZ1Q99689 392 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 RANBP17Q9H2T7 1088 aaKnown RBP17.89■□□□□ 0.45
ITGA4-201ENST00000233573 SPAG1Q07617 926 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 PDE4DQ08499 809 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 STK4Q13043 487 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 Q4G0T1 1027 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 TCP11X2Q5H9J9 407 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 TTI2Q6NXR4 508 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 ETNPPLQ8TBG4 499 aa17.89■□□□□ 0.45
ITGA4-201ENST00000233573 DHTKD1Q96HY7 919 aaPredicted RBP17.89■□□□□ 0.45
ITGA4-201ENST00000233573 DOCK1Q14185 1865 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 UQCRHLA0A096LP55 91 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 CTNND1O60716 968 aaKnown RBP17.88■□□□□ 0.45
ITGA4-201ENST00000233573 UQCRHP07919 91 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 CIITAP33076 1130 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 GPR162Q16538 588 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 MYRIPQ8NFW9 859 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 WRNIP1Q96S55 665 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 GTPBP4Q9BZE4 634 aaKnown RBP17.88■□□□□ 0.45
ITGA4-201ENST00000233573 ADARB2Q9NS39 739 aaKnown RBP17.88■□□□□ 0.45
ITGA4-201ENST00000233573 EXOC1Q9NV70 894 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 FBXO28Q9NVF7 368 aa17.88■□□□□ 0.45
ITGA4-201ENST00000233573 PVALEFA0A1B0GWK0 134 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 PSMA7O14818 248 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 TBX3O15119 743 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 FCER1AP12319 257 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 TNNT1P13805 278 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 SPIRE1Q08AE8 756 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 PRKG1Q13976 671 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 KCNJ18B7U540 433 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 SLC26A4O43511 780 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 NRDCO43847 1150 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 CYP3A4P08684 503 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 EHHADHQ08426 723 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 STIM1Q13586 685 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 KCNJ12Q14500 433 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 DCAF15Q66K64 600 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 UNC13DQ70J99 1090 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 SLFN12Q8IYM2 578 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 KIAA0895Q8NCT3 520 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 CHURC1Q8WUH1 139 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 CCDC47Q96A33 483 aaKnown RBP17.87■□□□□ 0.45
ITGA4-201ENST00000233573 KIFC2Q96AC6 838 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 DUSP9Q99956 384 aaKnown RBP17.87■□□□□ 0.45
ITGA4-201ENST00000233573 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
ITGA4-201ENST00000233573 TRMT1Q9NXH9 659 aaKnown RBP17.87■□□□□ 0.45
ITGA4-201ENST00000233573 SPDYE3A6NKU9 549 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 ADM5C9JUS6 153 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 FAM86B1E9PN63 330 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 FAM86B2P0C5J1 330 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 HOXA13P31271 388 aaPredicted RBP17.86■□□□□ 0.45
ITGA4-201ENST00000233573 COPB1P53618 953 aaKnown RBP17.86■□□□□ 0.45
ITGA4-201ENST00000233573 TRAF1Q13077 416 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 ITIH6Q6UXX5 1313 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 CCNE1P24864 410 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 GTF2F1P35269 517 aaKnown RBP eCLIP17.86■□□□□ 0.45
ITGA4-201ENST00000233573 ADKP55263 362 aaKnown RBP17.86■□□□□ 0.45
ITGA4-201ENST00000233573 FILIP1LQ4L180 1135 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 PPP1R13BQ96KQ4 1090 aa17.86■□□□□ 0.45
ITGA4-201ENST00000233573 KDM3AQ9Y4C1 1321 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 MARCH6O60337 910 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 PPP1R2P41236 205 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 MTMR2Q13614 643 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 P2RX5Q93086 422 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 NT5C3AQ9H0P0 336 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 ZNF112Q9UJU3 913 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 FEM1BQ9UK73 627 aa17.85■□□□□ 0.45
ITGA4-201ENST00000233573 CCT6AP40227 531 aaKnown RBP17.84■□□□□ 0.45
ITGA4-201ENST00000233573 PRR16Q569H4 304 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 FCHSD1Q86WN1 690 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 SCYL3Q8IZE3 742 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 TBC1D5Q92609 795 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 DNAJC19Q96DA6 116 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 LRRC27Q9C0I9 530 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 TAB2Q9NYJ8 693 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
ITGA4-201ENST00000233573 N4BP3O15049 544 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 ARHGAP6O43182 974 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 STX10O60499 249 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 EEF1GP26641 437 aaKnown RBP17.84■□□□□ 0.45
ITGA4-201ENST00000233573 RBL2Q08999 1139 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 PTPN14Q15678 1187 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 ANKRD40Q6AI12 368 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 NOC3LQ8WTT2 800 aaKnown RBP17.84■□□□□ 0.45
ITGA4-201ENST00000233573 DDX12PQ92771 950 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms