RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TRIM64A6NGJ6 449 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 TRIM64BA6NI03 449 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 IFIT1P09914 478 aaKnown RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 ATF3P18847 181 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 ZNF75DP51815 510 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 RAPGEF1Q13905 1077 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 ZNF746Q6NUN9 644 aaPredicted RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 CYP26C1Q6V0L0 522 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 DHX32Q7L7V1 743 aaKnown RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 C16orf45Q96MC5 204 aaPredicted RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 CYP27B1O15528 508 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 PIP5K1CO60331 668 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 CDC27P30260 824 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 ME1P48163 572 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 CORO7P57737 925 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
SPARC-201ENST00000231061 MAATS1Q7Z4T9 603 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 PLBD2Q8NHP8 589 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 ARHGEF2Q92974 986 aaKnown RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 CTAGE1Q96RT6 745 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 NAP1L3Q99457 506 aaPredicted RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 A0A087WWV3 80 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 AKR1B15C9JRZ8 316 aaPredicted RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 ZEB2O60315 1214 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 RASA1P20936 1047 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 TCF7P36402 384 aaPredicted RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 TUBA1BP68363 451 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 TUBA1AQ71U36 451 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 ESX1Q8N693 406 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 ATP6V1E2Q96A05 226 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 PLEKHA5Q9HAU0 1116 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 SLIT3O75094 1523 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 A0A0G2JLW4 131 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 ERLIN2O94905 339 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 MTHFD1P11586 935 aaKnown RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 TPM4P67936 248 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 PCSK7Q16549 785 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 MAJINQ3KP22 176 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 TTLL7Q6ZT98 887 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 NSUN7Q8NE18 718 aaKnown RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 DYDC1Q8WWB3 177 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
SPARC-201ENST00000231061 ZNF510Q9Y2H8 683 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 MEGF6O75095 1541 aa9.19□□□□□ -0.94
SPARC-201ENST00000231061 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 SYNDIG1LA6NDD5 238 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 CTIFO43310 598 aaKnown RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 NEMFO60524 1076 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 SNX2O60749 519 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 PFKFB2O60825 505 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 SEPHS1P49903 392 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 SMTNP53814 917 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 HAND2P61296 217 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 C21orf62-AS1Q17RA5 79 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 INO80DQ53TQ3 878 aaPredicted RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 HSP90AA4PQ58FG1 418 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 TAS1R3Q7RTX0 852 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 RAB11FIP4Q86YS3 637 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 RASSF8Q8NHQ8 419 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 UQCC2Q9BRT2 126 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 JCADQ9P266 1359 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 TNFAIP3P21580 790 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 LRRC24Q50LG9 513 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 ARMC4Q5T2S8 1044 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 TMCO3Q6UWJ1 677 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 SLC15A3Q8IY34 581 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 FSIP1Q8NA03 581 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 ATP6V0A1Q93050 837 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 DKK3Q9UBP4 350 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 E7EWF7 191 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 KRT14P02533 472 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 IVLP07476 585 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 ZFXP17010 805 aaPredicted RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 GPTP24298 496 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 ANXA13P27216 316 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 KMT5BQ4FZB7 885 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 RNF187Q5TA31 235 aaPredicted RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 ZNF397Q8NF99 534 aaPredicted RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 ARL8AQ96BM9 186 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 SRPK1Q96SB4 655 aaKnown RBP9.18□□□□□ -0.94
SPARC-201ENST00000231061 AP1M1Q9BXS5 423 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPARC-201ENST00000231061 CCSER2Q9H7U1 834 aa9.18□□□□□ -0.94
SPARC-201ENST00000231061 SEC24DO94855 1032 aaPredicted RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 PAPOLAP51003 745 aaKnown RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 CTAG1AP78358 180 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 CBX3Q13185 183 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 ASIC2Q16515 512 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 STX1AQ16623 288 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 C11orf57Q6ZUT1 292 aaPredicted RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 DGLUCYQ7Z3D6 616 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 NPAS4Q8IUM7 802 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 PIH1D1Q9NWS0 290 aaKnown RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 TAGLN3Q9UI15 199 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 SH3TC1Q8TE82 1336 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms