RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 DHX36Q9H2U1 1008 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 NDST4Q9H3R1 872 aa24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 SASH3O75995 380 aa24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 FKBP1AP62942 108 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 APOBEC3HQ6NTF7 200 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 DDX12PQ92771 950 aa24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 BMP2KQ9NSY1 1161 aaPredicted RBP24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 SIK3Q9Y2K2 1263 aa24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 ANO9A1A5B4 782 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 POTEMA6NI47 508 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 MAP2K7O14733 419 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 USP11P51784 963 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 TTBK2Q6IQ55 1244 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 HAS1Q92839 578 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 PURBQ96QR8 312 aaKnown RBP24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 PLAGL2Q9UPG8 496 aa24.44■■□□□ 1.5
SMARCD2-201ENST00000225742 MYH7BA7E2Y1 1941 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 MARCH6O60337 910 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 PDE6BP35913 854 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 CKAP4Q07065 602 aaKnown RBP24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 UBE2SQ16763 222 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 MOXD1Q6UVY6 613 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 ZDHHC15Q96MV8 337 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 NYAP2Q9P242 653 aa24.43■■□□□ 1.5
SMARCD2-201ENST00000225742 USP17L10C9JJH3 530 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 G3V3G9 751 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 MPHOSPH10O00566 681 aaKnown RBP24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 NPM3O75607 178 aaKnown RBP24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 KLK7P49862 253 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 VAV2P52735 878 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 HDLBPQ00341 1268 aaKnown RBP24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 DCAF8Q5TAQ9 597 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 DYMQ7RTS9 669 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 HDXQ7Z353 690 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 CLEC10AQ8IUN9 316 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 HPS3Q969F9 1004 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 SAR1BQ9Y6B6 198 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 CYP3A7-CYP3A51PA0A087WV96 503 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 CYP3A7P24462 503 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 MCM3P25205 808 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 SMC1AQ14683 1233 aaKnown RBP24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 SPA17Q15506 151 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 BEND6Q5SZJ8 279 aaPredicted RBP24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 LRRC55Q6ZSA7 311 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 PODNQ7Z5L7 613 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 MYOCDQ8IZQ8 938 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 CCDC42Q96M95 316 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 MBOAT7Q96N66 472 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 NUDT12Q9BQG2 462 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 ST7Q9NRC1 585 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 TRIM10Q9UDY6 481 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 PCDHA12Q9UN75 941 aa24.42■■□□□ 1.5
SMARCD2-201ENST00000225742 IDEP14735 1019 aa24.41■■□□□ 1.5
SMARCD2-201ENST00000225742 CRKP46108 304 aa24.41■■□□□ 1.5
SMARCD2-201ENST00000225742 SCNN1DP51172 638 aa24.41■■□□□ 1.5
SMARCD2-201ENST00000225742 GPS2Q13227 327 aa24.41■■□□□ 1.5
SMARCD2-201ENST00000225742 DNAJC19Q96DA6 116 aa24.41■■□□□ 1.5
SMARCD2-201ENST00000225742 USO1O60763 962 aaKnown RBP24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 LCA5LO95447 670 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 KIF5AQ12840 1032 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 DOK7Q18PE1 504 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 WDR93Q6P2C0 686 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 TXLNBQ8N3L3 684 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 CEP63Q96MT8 703 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 PNKPQ96T60 521 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 KANSL2Q9H9L4 492 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 ARFGEF1Q9Y6D6 1849 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 GNA14O95837 355 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 COASYQ13057 564 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 AP3B2Q13367 1082 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 KCNK18Q7Z418 384 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 MASTLQ96GX5 879 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 STK24Q9Y6E0 443 aa24.4■■□□□ 1.5
SMARCD2-201ENST00000225742 SLC16A2P36021 539 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 FKBP3Q00688 224 aaKnown RBP24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 ATP2B2Q01814 1243 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 KCTD1Q719H9 257 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 CCDC65Q8IXS2 484 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 SLFN12Q8IYM2 578 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 IDI2Q9BXS1 227 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 PANK4Q9NVE7 773 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 ADAMTSL1Q8N6G6 1762 aa24.39■■□□□ 1.49
SMARCD2-201ENST00000225742 OAS2P29728 719 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 QRICH1Q2TAL8 776 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 ZCWPW2Q504Y3 356 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 FAM26FQ5R3K3 315 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 EEF2KMTQ96G04 330 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 PKNOX2Q96KN3 472 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 NUCKS1Q9H1E3 243 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 KCNMB3Q9NPA1 279 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 PI4KBQ9UBF8 816 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 ZHX1Q9UKY1 873 aaPredicted RBP24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 EIF3JO75822 258 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 ATP1A1P05023 1023 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 SLFN13Q68D06 897 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 KRT27Q7Z3Y8 459 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 SECISBP2LQ93073 1101 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 MXD3Q9BW11 206 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 L1RE1Q9UN81 338 aa24.38■■□□□ 1.49
SMARCD2-201ENST00000225742 SIPA1L1O43166 1804 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms