RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 SEMA6BQ9H3T3 888 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 PSTPIP2Q9H939 334 aa23.42■■□□□ 1.34
CCDC130-201ENST00000221554 NPM3O75607 178 aaKnown RBP23.41■■□□□ 1.34
CCDC130-201ENST00000221554 PLA2G4AP47712 749 aa23.41■■□□□ 1.34
CCDC130-201ENST00000221554 USP11P51784 963 aa23.41■■□□□ 1.34
CCDC130-201ENST00000221554 CCDC96Q2M329 555 aa23.41■■□□□ 1.34
CCDC130-201ENST00000221554 SLC39A2Q9NP94 309 aa23.41■■□□□ 1.34
CCDC130-201ENST00000221554 REXO2Q9Y3B8 237 aaKnown RBP23.41■■□□□ 1.34
CCDC130-201ENST00000221554 A0A0U1RQJ8 604 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 CCDC122Q5T0U0 273 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 ATRIPQ8WXE1 791 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 ZDHHC15Q96MV8 337 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
CCDC130-201ENST00000221554 NHEJ1Q9H9Q4 299 aaPredicted RBP23.4■■□□□ 1.34
CCDC130-201ENST00000221554 NYAP2Q9P242 653 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 GUCA1BQ9UMX6 200 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 STK24Q9Y6E0 443 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 F8W031 263 aaPredicted RBP23.4■■□□□ 1.34
CCDC130-201ENST00000221554 MCM3P25205 808 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 AMPD2Q01433 879 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 EHHADHQ08426 723 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 APOBEC3HQ6NTF7 200 aaKnown RBP23.4■■□□□ 1.34
CCDC130-201ENST00000221554 MOXD1Q6UVY6 613 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 TXLNBQ8N3L3 684 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 PUF60Q9UHX1 559 aaKnown RBP23.4■■□□□ 1.34
CCDC130-201ENST00000221554 PCDHA12Q9UN75 941 aa23.4■■□□□ 1.34
CCDC130-201ENST00000221554 GREB1LQ9C091 1923 aaPredicted RBP23.39■■□□□ 1.34
CCDC130-201ENST00000221554 ANO9A1A5B4 782 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 EDIL3O43854 480 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 TBC1D8O95759 1140 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 GPS2Q13227 327 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 ZNF771Q7L3S4 317 aaPredicted RBP23.39■■□□□ 1.33
CCDC130-201ENST00000221554 DDX12PQ92771 950 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 JAKMIP2Q96AA8 810 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 MASTLQ96GX5 879 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 NDST4Q9H3R1 872 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 KANSL2Q9H9L4 492 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 STK32BQ9NY57 414 aa23.39■■□□□ 1.33
CCDC130-201ENST00000221554 ATF5Q9Y2D1 282 aaPredicted RBP23.39■■□□□ 1.33
CCDC130-201ENST00000221554 NRXN2Q9P2S2 1712 aa23.38■■□□□ 1.33
CCDC130-201ENST00000221554 MPHOSPH10O00566 681 aaKnown RBP23.38■■□□□ 1.33
CCDC130-201ENST00000221554 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
CCDC130-201ENST00000221554 HERVK_113P62684 666 aa23.38■■□□□ 1.33
CCDC130-201ENST00000221554 CKAP4Q07065 602 aaKnown RBP23.38■■□□□ 1.33
CCDC130-201ENST00000221554 SPA17Q15506 151 aa23.38■■□□□ 1.33
CCDC130-201ENST00000221554 PAPD7Q5XG87 772 aaKnown RBP23.38■■□□□ 1.33
CCDC130-201ENST00000221554 UBXN6Q9BZV1 441 aa23.38■■□□□ 1.33
CCDC130-201ENST00000221554 AGPAT5Q9NUQ2 364 aa23.38■■□□□ 1.33
CCDC130-201ENST00000221554 PLAGL2Q9UPG8 496 aa23.38■■□□□ 1.33
CCDC130-201ENST00000221554 CYP3A7-CYP3A51PA0A087WV96 503 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 RASSF10A6NK89 507 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 USO1O60763 962 aaKnown RBP23.37■■□□□ 1.33
CCDC130-201ENST00000221554 GNA14O95837 355 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 CYP3A7P24462 503 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 CRKP46108 304 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 AP3B2Q13367 1082 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 TRAPPC11Q7Z392 1133 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 SLFN12Q8IYM2 578 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 PI4KBQ9UBF8 816 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 PPP1R11O60927 126 aaPredicted RBP23.37■■□□□ 1.33
CCDC130-201ENST00000221554 KIF5AQ12840 1032 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 TEX2Q8IWB9 1127 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 MYOCDQ8IZQ8 938 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 CCDC42Q96M95 316 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 FUT8Q9BYC5 575 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 NUCKS1Q9H1E3 243 aaKnown RBP23.37■■□□□ 1.33
CCDC130-201ENST00000221554 ANKZF1Q9H8Y5 726 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 SAR1BQ9Y6B6 198 aa23.37■■□□□ 1.33
CCDC130-201ENST00000221554 POTEMA6NI47 508 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 SEC31AO94979 1220 aaKnown RBP23.36■■□□□ 1.33
CCDC130-201ENST00000221554 IDEP14735 1019 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 R3HDM1Q15032 1099 aaKnown RBP23.36■■□□□ 1.33
CCDC130-201ENST00000221554 LONRF2Q1L5Z9 754 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 DYMQ7RTS9 669 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 HDXQ7Z353 690 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 CCDC65Q8IXS2 484 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 HAS1Q92839 578 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 CEP63Q96MT8 703 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 IDI2Q9BXS1 227 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 SIK3Q9Y2K2 1263 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 ANKRD31Q8N7Z5 1873 aa23.36■■□□□ 1.33
CCDC130-201ENST00000221554 USP17L10C9JJH3 530 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 SCNN1DP51172 638 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 VAV2P52735 878 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 FKBP3Q00688 224 aaKnown RBP23.35■■□□□ 1.33
CCDC130-201ENST00000221554 UBE2SQ16763 222 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 DOK7Q18PE1 504 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 TTBK2Q6IQ55 1244 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 EPC1Q9H2F5 836 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 ABL1P00519 1130 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 ATP2B2Q01814 1243 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 STRIP1Q5VSL9 837 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 COL23A1Q86Y22 540 aaPredicted RBP23.35■■□□□ 1.33
CCDC130-201ENST00000221554 MBOAT7Q96N66 472 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 PURBQ96QR8 312 aaKnown RBP23.35■■□□□ 1.33
CCDC130-201ENST00000221554 TRIM34Q9BYJ4 488 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 ZSWIM4Q9H7M6 989 aa23.35■■□□□ 1.33
CCDC130-201ENST00000221554 MAP2K7O14733 419 aa23.34■■□□□ 1.33
CCDC130-201ENST00000221554 TBX3O15119 743 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms