RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 LARSQ9P2J5 1176 aaKnown RBP10.42□□□□□ -0.74
CCDC113-201ENST00000219299 FRMD4BQ9Y2L6 1034 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 KCPQ6ZWJ8 1503 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 SLURP2P0DP57 97 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 FDX1P10109 184 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 C10orf67Q8IYJ2 551 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
CCDC113-201ENST00000219299 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC113-201ENST00000219299 AKR1B10O60218 316 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 RHBDL3P58872 404 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 KRBA2Q6ZNG9 492 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 ATP6V0A1Q93050 837 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 EEF2KMTQ96G04 330 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 EPSTI1Q96J88 318 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 FNBP1Q96RU3 617 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 AP5M1Q9H0R1 490 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 RABGAP1Q9Y3P9 1069 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 NFE2L3Q9Y4A8 694 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 PPP6R2O75170 966 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 BIRC3Q13489 604 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 TRIM6Q9C030 488 aaPredicted RBP10.41□□□□□ -0.74
CCDC113-201ENST00000219299 VPS16Q9H269 839 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 ABCB11O95342 1321 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 PTGS1P23219 599 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 MMP14P50281 582 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 UBXN1Q04323 297 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
CCDC113-201ENST00000219299 GBA2Q9HCG7 927 aaPredicted RBP10.41□□□□□ -0.74
CCDC113-201ENST00000219299 A0A087WWV3 80 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 PAK1Q13153 545 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 STXBP2Q15833 593 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 FAM178BQ8IXR5 827 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 DEPTORQ8TB45 409 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 JADE2Q9NQC1 790 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 PCDHA5Q9Y5H7 936 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 A0A1W2PQ27 194 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 A0A1W2PQ64 194 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 A0A1W2PQD8 194 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 EXOC3O60645 756 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 FCER1AP12319 257 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
CCDC113-201ENST00000219299 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.74
CCDC113-201ENST00000219299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCDC113-201ENST00000219299 PPP1R2P41236 205 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 MTMR1Q13613 665 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 BAATQ14032 418 aaPredicted RBP10.4□□□□□ -0.74
CCDC113-201ENST00000219299 ERO1BQ86YB8 467 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 EHD4Q9H223 541 aa10.4□□□□□ -0.74
CCDC113-201ENST00000219299 SHMT1P34896 483 aa10.4□□□□□ -0.75
CCDC113-201ENST00000219299 CA8P35219 290 aa10.4□□□□□ -0.75
CCDC113-201ENST00000219299 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.75
CCDC113-201ENST00000219299 AK8Q96MA6 479 aa10.4□□□□□ -0.75
CCDC113-201ENST00000219299 SLC39A2Q9NP94 309 aa10.4□□□□□ -0.75
CCDC113-201ENST00000219299 VPS18Q9P253 973 aa10.4□□□□□ -0.75
CCDC113-201ENST00000219299 LRRIQ4A6NIV6 560 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 TNPO2O14787 897 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 FKBP1AP62942 108 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 TBC1D8BQ0IIM8 1120 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 OTUD6BQ8N6M0 293 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 LARP4BQ92615 738 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 CEP170P1Q96L14 293 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 GAKO14976 1311 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 M0QZ92 97 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 DNA2P51530 1060 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 ZNF445P59923 1031 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 FAM160B1Q5W0V3 765 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 SLC7A3Q8WY07 619 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 JMJD4Q9H9V9 463 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 FAM198AQ9UFP1 575 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 EXOC7Q9UPT5 735 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 FAM208AQ9UK61 1670 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 TRPM3Q9HCF6 1732 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 POTEMA6NI47 508 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 Q3C1V9 767 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 SRPRBQ9Y5M8 271 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 TDP2O95551 362 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC172P0C7W6 258 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 ODR4Q5SWX8 454 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 DPH6Q7L8W6 267 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 GRAMD1CQ8IYS0 662 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 GPT2Q8TD30 523 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 AGBL1Q96MI9 1066 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 NOC4LQ9BVI4 516 aaKnown RBP10.39□□□□□ -0.75
CCDC113-201ENST00000219299 COL4A3BPQ9Y5P4 624 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 STRCP1A6NGW2 1772 aa10.39□□□□□ -0.75
CCDC113-201ENST00000219299 BACE1P56817 501 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 NLRP12P59046 1061 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 FAM26FQ5R3K3 315 aa10.38□□□□□ -0.75
CCDC113-201ENST00000219299 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms