RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NDUFA10O95299 355 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TNNC2P02585 160 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 GJC1P36383 396 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 PDCD2Q16342 344 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 TCP11X2Q5H9J9 407 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 NCAPH2Q6IBW4 605 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ZBTB8OSQ8IWT0 167 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 SPEF2Q9C093 1822 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 GFPT2O94808 682 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 FGAP02671 866 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ANXA1P04083 346 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 PTK2Q05397 1052 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MIER3Q7Z3K6 550 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 NEK9Q8TD19 979 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TEKT3Q9BXF9 490 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 BAIAP2L1Q9UHR4 511 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 CCPG1Q9ULG6 757 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 LEMD3Q9Y2U8 911 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 SCINQ9Y6U3 715 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 A0A1W2PQC6 194 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 SH2B2O14492 632 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 PPP1R12AO14974 1030 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 MAP3K7O43318 606 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TTC4O95801 387 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ACTN1P12814 892 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 PLCB4Q15147 1175 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 APOA5Q6Q788 366 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TSPYL2Q9H2G4 693 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 PSD3Q9NYI0 1048 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 VPS54Q9P1Q0 977 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 UBE4BO95155 1302 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 NOP56O00567 594 aaKnown RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 MFAP3LO75121 409 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MYBL1P10243 752 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 GUCY2DQ02846 1103 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ADAM9Q13443 819 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TEDDM1Q5T9Z0 273 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 NME8Q8N427 588 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 U2AF1L4Q8WU68 220 aaKnown RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.79□□□□□ -1.64
CHD9-201ENST00000219084 CEP72Q9P209 647 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 PALLDQ8WX93 1383 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ITIH6Q6UXX5 1313 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 IQANK1A0A1B0GTG1 560 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 UFL1O94874 794 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 INHBAP08476 426 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 POLR2MP0CAP2 368 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 CASP14P31944 242 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 CLCN6P51797 869 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 RAD51AP2Q09MP3 1159 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 CASP8Q14790 479 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 FAM26FQ5R3K3 315 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TRIM50Q86XT4 487 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 PNMA1Q8ND90 353 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ANKRD27Q96NW4 1050 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 OLFM3Q96PB7 478 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 NHEJ1Q9H9Q4 299 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 NOP53Q9NZM5 478 aaKnown RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 AKAP12Q02952 1782 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TOM1O60784 492 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TTLL1O95922 423 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 COG7P83436 770 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 RESTQ13127 1097 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MAPK8IP2Q13387 824 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 FAM160B1Q5W0V3 765 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TADA2BQ86TJ2 420 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ZNF354CQ86Y25 554 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MOV10L1Q9BXT6 1211 aaKnown RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 TRIM33Q9UPN9 1127 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 PIK3C2BO00750 1634 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 NCOA3Q9Y6Q9 1424 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ATP8B3O60423 1300 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TNKSO95271 1327 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MCF2LO15068 1137 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 XPOTO43592 962 aaKnown RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 IBSPP21815 317 aaPredicted RBP4.79□□□□□ -1.64
CHD9-201ENST00000219084 POLD1P28340 1107 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 TFDP1Q14186 410 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 CCDC93Q567U6 631 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MICAL1Q8TDZ2 1067 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 ATP6V0A1Q93050 837 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 RABEP2Q9H5N1 569 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 MAN1B1Q9UKM7 699 aa4.79□□□□□ -1.64
CHD9-201ENST00000219084 RXRAP19793 462 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ATP2B4P23634 1241 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 KIF23Q02241 960 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 PTH1RQ03431 593 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 RAB44Q7Z6P3 723 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 ST13P4Q8IZP2 240 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 ZNF622Q969S3 477 aaKnown RBP eCLIP4.78□□□□□ -1.645e-7■■□□□ 12.3
CHD9-201ENST00000219084 NACC1Q96RE7 527 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 FOXP3Q9BZS1 431 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ZMYND12Q9H0C1 365 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 CHUKO15111 745 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 RBL2Q08999 1139 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TEX2Q8IWB9 1127 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 CACTINQ8WUQ7 758 aaKnown RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 GCOM2Q9BZD3 368 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 SLITRK6Q9H5Y7 841 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms