RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 KMT5AQ9NQR1 393 aa20.58■□□□□ 0.89
MBD3-201ENST00000156825 EP400NLQ6ZTU2 488 aa20.58■□□□□ 0.88
MBD3-201ENST00000156825 NEDD4P46934 1319 aa20.58■□□□□ 0.88
MBD3-201ENST00000156825 STX2P32856 288 aa20.58■□□□□ 0.88
MBD3-201ENST00000156825 FKBP3Q00688 224 aaKnown RBP20.58■□□□□ 0.88
MBD3-201ENST00000156825 TOB2Q14106 344 aaPredicted RBP20.58■□□□□ 0.88
MBD3-201ENST00000156825 NT5C1BQ96P26 610 aa20.58■□□□□ 0.88
MBD3-201ENST00000156825 SOWAHDA6NJG2 315 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 PTK2Q05397 1052 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 MTMR3Q13615 1198 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 KCTD16Q68DU8 428 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 NME8Q8N427 588 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 MCUR1Q96AQ8 359 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 LAD1O00515 517 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 ZNF500O60304 480 aaPredicted RBP20.57■□□□□ 0.88
MBD3-201ENST00000156825 DDIT3P35638 169 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 HADHQ16836 314 aaKnown RBP20.57■□□□□ 0.88
MBD3-201ENST00000156825 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
MBD3-201ENST00000156825 SPTLC3Q9NUV7 552 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 TFAMQ00059 246 aaKnown RBP20.57■□□□□ 0.88
MBD3-201ENST00000156825 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 AK8Q96MA6 479 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 RIC8AQ9NPQ8 531 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 NXF1Q9UBU9 619 aaKnown RBP20.57■□□□□ 0.88
MBD3-201ENST00000156825 GOLGA8SH3BPF8 625 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 ITKQ08881 620 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 LGSNQ5TDP6 509 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 ZNF658Q5TYW1 1059 aaPredicted RBP20.57■□□□□ 0.88
MBD3-201ENST00000156825 PPFIBP2Q8ND30 876 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 RILPQ96NA2 401 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 NUB1Q9Y5A7 615 aa20.57■□□□□ 0.88
MBD3-201ENST00000156825 GOLGA8IPA6NC78 632 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 GOLGA8JA6NMD2 632 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 CIB2O75838 187 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 GFPT2O94808 682 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 ADCY1Q08828 1119 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 ZBTB33Q86T24 672 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 SLC12A2P55011 1212 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 SPATA24Q86W54 205 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 MAIP1Q8WWC4 291 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 FAM149B1Q96BN6 582 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 DHTKD1Q96HY7 919 aaPredicted RBP20.56■□□□□ 0.88
MBD3-201ENST00000156825 RASSF4Q9H2L5 321 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 MYO1FO00160 1098 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 RPS6KA4O75676 772 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 PSMC2P35998 433 aaKnown RBP20.56■□□□□ 0.88
MBD3-201ENST00000156825 FAM160B1Q5W0V3 765 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 RPGRIP1Q96KN7 1286 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 ZNF341Q9BYN7 854 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 BHMT2Q9H2M3 363 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 EMILIN3Q9NT22 766 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 SRPRBQ9Y5M8 271 aaKnown RBP20.56■□□□□ 0.88
MBD3-201ENST00000156825 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 PAGE5Q96GU1 130 aa20.56■□□□□ 0.88
MBD3-201ENST00000156825 DHX36Q9H2U1 1008 aaKnown RBP20.56■□□□□ 0.88
MBD3-201ENST00000156825 USP17L5A8MUK1 530 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 GMNNO75496 209 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 RNF8O76064 485 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 MARK3P27448 753 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 GDAQ9Y2T3 454 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 ABCC12Q96J65 1359 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 FTCDO95954 541 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 PLA2G4BP0C869 781 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 GNGT1P63211 74 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 I3L4J1 428 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 SEC31AO94979 1220 aaKnown RBP20.55■□□□□ 0.88
MBD3-201ENST00000156825 BFSP1Q12934 665 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 BRD3Q15059 726 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 PIGOQ8TEQ8 1089 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 AFPP02771 609 aaKnown RBP20.55■□□□□ 0.88
MBD3-201ENST00000156825 ARID5BQ14865 1188 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 PPP1R12CQ9BZL4 782 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 CUEDC2Q9H467 287 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 ADGRL3Q9HAR2 1447 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 SNX1Q13596 522 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 AOC3Q16853 763 aa20.55■□□□□ 0.88
MBD3-201ENST00000156825 EFCAB8A8MWE9 144 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 H0YCG3 227 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 THAP12O43422 761 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 C7orf31Q8N865 590 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 NACC1Q96RE7 527 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 WDR11Q9BZH6 1224 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 MAD1L1Q9Y6D9 718 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 NPR1P16066 1061 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 EEF1GP26641 437 aaKnown RBP20.54■□□□□ 0.88
MBD3-201ENST00000156825 KMT5BQ4FZB7 885 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 ANKRD20A3Q5VUR7 823 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 PARP2Q9UGN5 583 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 GCFC2P16383 781 aaKnown RBP20.54■□□□□ 0.88
MBD3-201ENST00000156825 MAN2A1Q16706 1144 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 OXER1Q8TDS5 423 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 ZNF653Q96CK0 615 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 PALM3A6NDB9 673 aaPredicted RBP20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L15C9J2P7 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L13C9JLJ4 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L11C9JVI0 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L18D6R9N7 530 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms