RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ASIC1P78348 528 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 TBX2Q13207 712 aaPredicted RBP16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 ARID5BQ14865 1188 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 PRR16Q569H4 304 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 ARMCX5Q6P1M9 558 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 UNC13DQ70J99 1090 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 CCDC84Q86UT8 332 aaPredicted RBP16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 SCYL3Q8IZE3 742 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 KCTD17Q8N5Z5 321 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 EXOC1Q9NV70 894 aa16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 LIMA1Q9UHB6 759 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 SCAF8Q9UPN6 1271 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-201ENST00000023939 DOCK1Q14185 1865 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 MYMKA6NI61 221 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 FDX1P10109 184 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 SKILP12757 684 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 MCM6Q14566 821 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 ANGEL2Q5VTE6 544 aaKnown RBP16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 ADD3Q9UEY8 706 aaKnown RBP16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 RABGAP1Q9Y3P9 1069 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 ZNF536O15090 1300 aa16.03■□□□□ 0.16
RTFDC1-201ENST00000023939 IGLV3-22A0A075B6J6 115 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 SFPQP23246 707 aaKnown RBP eCLIP16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 HSD17B4P51659 736 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 PDE4DQ08499 809 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 HAUS3Q68CZ6 603 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 TRPM4Q8TD43 1214 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 NOC3LQ8WTT2 800 aaKnown RBP16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 AS3MTQ9HBK9 375 aa16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 MAP3K20Q9NYL2 800 aaKnown RBP16.02■□□□□ 0.16
RTFDC1-201ENST00000023939 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 CFBP00751 764 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 TERF1P54274 439 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 EHHADHQ08426 723 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 ECM1Q16610 540 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 TPD52L1Q16890 204 aaPredicted RBP16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 FOXR2Q6PJQ5 311 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 KCNK18Q7Z418 384 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 C17orf53Q8N3J3 647 aaPredicted RBP16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 C12orf42Q96LP6 360 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.15
RTFDC1-201ENST00000023939 MSH4O15457 936 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 NRDCO43847 1150 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 PBX1P40424 430 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 PSMD2Q13200 908 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 FILIP1LQ4L180 1135 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 NOL9Q5SY16 702 aaKnown RBP16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 TTI2Q6NXR4 508 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 TBC1D5Q92609 795 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 GJA10Q969M2 543 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 THAP9Q9H5L6 903 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 VAV3Q9UKW4 847 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 CCPG1Q9ULG6 757 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 PPP1R9AQ9ULJ8 1098 aa16.01■□□□□ 0.15
RTFDC1-201ENST00000023939 RPTORQ8N122 1335 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 BICDL2A1A5D9 508 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 PTPRAP18433 802 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 VCAM1P19320 739 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 CCNE1P24864 410 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 RPA1P27694 616 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 ZNF76P36508 570 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 BACE1P56817 501 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 STK4Q13043 487 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 HSP90AA4PQ58FG1 418 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 TCP11X2Q5H9J9 407 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 MCF2L2Q86YR7 1114 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 ANKRD20A12PQ8NF67 263 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 CLEC4DQ8WXI8 215 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 P2RX5Q93086 422 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 PICK1Q9NRD5 415 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 ITIH6Q6UXX5 1313 aa16■□□□□ 0.15
RTFDC1-201ENST00000023939 EEF1GP26641 437 aaKnown RBP15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 HIRAP54198 1017 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 MTMR2Q13614 643 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 SUPT20HL1Q3ZLR7 823 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 ZNF280CQ8ND82 737 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 DDX12PQ92771 950 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 SLC5A5Q92911 643 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 POLR3CQ9BUI4 534 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 SBF1O95248 1867 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 KCNJ18B7U540 433 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 C19orf81C9J6K1 198 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 MED24O75448 989 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 EPS15P42566 896 aa15.99■□□□□ 0.15
RTFDC1-201ENST00000023939 SPP2Q13103 211 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms