RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 OTUD7AQ8TE49 926 aaPredicted RBP13.09□□□□□ -0.31
NME1-201ENST00000013034 DHX38Q92620 1227 aaKnown RBP13.09□□□□□ -0.31
NME1-201ENST00000013034 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
NME1-201ENST00000013034 KATNAL1Q9BW62 490 aa13.09□□□□□ -0.31
NME1-201ENST00000013034 UBE2ZQ9H832 354 aaPredicted RBP13.09□□□□□ -0.31
NME1-201ENST00000013034 PTPRSQ13332 1948 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 ABHD14A-ACY1A0A1B0GW23 586 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.32
NME1-201ENST00000013034 CHMP4BP1P59074 171 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 ERVK-21P61565 698 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 ARHGAP1Q07960 439 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 GPNMBQ14956 572 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 TTC14Q96N46 770 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 RAD9AQ99638 391 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
NME1-201ENST00000013034 GTF2IRD1Q9UHL9 959 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
NME1-201ENST00000013034 LINC01553A4QN01 128 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 PI4K2BG5E9Z4 385 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 CKBP12277 381 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 CASTP20810 708 aaKnown RBP13.07□□□□□ -0.32
NME1-201ENST00000013034 DGKDQ16760 1214 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 USH1GQ495M9 461 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 KAT2BQ92831 832 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.32
NME1-201ENST00000013034 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
NME1-201ENST00000013034 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 ABCB11O95342 1321 aa13.07□□□□□ -0.32
NME1-201ENST00000013034 FAM86C2PA6NEL3 165 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 NBNO60934 754 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 F2P00734 622 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 FGAP02671 866 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 NT5C2P49902 561 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 PTK7Q13308 1070 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 IKBKEQ14164 716 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 STXBP2Q15833 593 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 TMCO2Q7Z6W1 182 aaPredicted RBP13.06□□□□□ -0.32
NME1-201ENST00000013034 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 C7orf31Q8N865 590 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
NME1-201ENST00000013034 IWS1Q96ST2 819 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 MTUS1Q9ULD2 1270 aa13.06□□□□□ -0.32
NME1-201ENST00000013034 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.05□□□□□ -0.32
NME1-201ENST00000013034 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 PSEN2P49810 448 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
NME1-201ENST00000013034 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 FAM178BQ8IXR5 827 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 TET1Q8NFU7 2136 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
NME1-201ENST00000013034 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
NME1-201ENST00000013034 HDAC6Q9UBN7 1215 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 EMSYQ7Z589 1322 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
NME1-201ENST00000013034 SIP14410 1827 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 A0A0D9SFI3 127 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 HAS3O00219 553 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
NME1-201ENST00000013034 MFSD10Q14728 455 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 TCTN1Q2MV58 587 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
NME1-201ENST00000013034 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 TRAF7Q6Q0C0 670 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 MFSD6Q6ZSS7 791 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 CHST3Q7LGC8 479 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 GJD3Q8N144 294 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 ESR2Q92731 530 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 CD320Q9NPF0 282 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 INSL6Q9Y581 213 aa13.04□□□□□ -0.32
NME1-201ENST00000013034 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 LGR5O75473 907 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 AMHP03971 560 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 HOXD8P13378 290 aaPredicted RBP13.03□□□□□ -0.32
NME1-201ENST00000013034 KCNA5P22460 613 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 HAND2P61296 217 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 LAMC2Q13753 1193 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 PTPROQ16827 1216 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 PUS10Q3MIT2 529 aaKnown RBP13.03□□□□□ -0.32
NME1-201ENST00000013034 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 DGKHQ86XP1 1220 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
NME1-201ENST00000013034 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
NME1-201ENST00000013034 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
NME1-201ENST00000013034 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms