RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Map3k14Q9WUL6 942 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ripor3A1L3T7 938 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Plcb2A3KGF7 1181 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Smarce1O54941 411 aaKnown RBP10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Dnajb6O54946 365 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Adra2bP30545 450 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Smad4P97471 551 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Utp18Q5SSI6 552 aaKnown RBP10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Q6P2K3 674 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mcph1Q7TT79 822 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Lrfn3Q8BLY3 626 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Jakmip1Q8BVL9 626 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Nup88Q8CEC0 753 aaKnown RBP10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Calhm5Q8R100 309 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Top1mtQ8R4U6 593 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Krt25Q8VCW2 446 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 AdpgkQ8VDL4 496 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Nr3c2Q8VII8 978 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Tjp3Q9QXY1 905 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Add2Q9QYB8 725 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 FAM186AQ9D9R9 1790 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Dock2Q8C3J5 1828 aa10□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 AW822073A0A0N4SUK1 652 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Tbkbp1A2A9T0 611 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Cyp3a57D3YYZ0 503 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Rasa1E9PYG6 1038 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Bnip3O55003 187 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Tph1P17532 447 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Yap1P46938 488 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ephb3P54754 993 aaKnown RBP9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 EvcP57680 1005 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mfsd14aP70187 490 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Kif20aP97329 887 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 GabpaQ00422 454 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Znf865Q3U3I9 1058 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Etaa1Q5SVT3 877 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Neu4Q8BZL1 478 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ccdc15Q8C9M2 810 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Q8K2W9 541 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 KinQ8K339 391 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Bst2Q8R2Q8 172 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Zcchc18Q8VD24 393 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Rhobtb2Q91V93 728 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Pold4Q9CWP8 107 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Cdc42ep4Q9JM96 349 aaKnown RBP9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 TriobpQ99KW3 2014 aa9.99□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Zfhx2Q2MHN3 2562 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gm45015A0A140LII9 184 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gm18336A0A140LIU8 765 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Dcpp3L7N259 170 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Angpt1O08538 498 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Clec11aO88200 328 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Fmr1P35922 614 aaKnown RBP9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Traf1P39428 409 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 PuraP42669 321 aaKnown RBP9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Lig3P97386 1015 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Pou2f2Q00196 463 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gtf3c3Q3TMP1 882 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Lrrc55Q3UY51 311 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Bahd1Q497V6 772 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ddx19aQ61655 478 aaKnown RBP9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Avpr1aQ62463 423 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Swap70Q6A028 585 aaKnown RBP9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 RtknQ8C6B2 564 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 MafaQ8CF90 359 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Slc26a8Q8R0C3 999 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Olfr1494Q8VGP8 315 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Phf14Q9D4H9 881 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Slx4ipQ9D7Y9 413 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gdpd2Q9ESM6 539 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Dock3Q8CIQ7 2027 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Aox3G3X982 1335 aa9.98□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Malrd1A2AJX4 2123 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 A0A1W2P6Q8 802 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gm9048A0A1W2P7H4 802 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 A0A1W2P7Z8 802 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gm9046A0A1W2P855 802 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Kcnb2A6H8H5 907 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Phactr2B1AVP0 632 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gm3383J3QQ59 259 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Copb2O55029 905 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ptpn11P35235 597 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Cops2P61202 443 aaKnown RBP9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Znf667Q2TL60 609 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gm1587Q3UT80 123 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 G2e3Q5RJY2 716 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Vps54Q5SPW0 977 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Edrf1Q6GQV7 1239 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ush1gQ80T11 461 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ubxn10Q8BG34 277 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Fermt2Q8CIB5 680 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Rhot2Q8JZN7 620 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Glipr1l2Q9CQ35 332 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 PdhbQ9D051 359 aa9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mkrn2Q9ERV1 416 aaKnown RBP9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mad1l1Q9WTX8 717 aaKnown RBP9.97□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Col5a3Q9JLI2 1739 aa9.96□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ltbp2O08999 1813 aa9.96□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 3110082J24RikF6Z6Z2 108 aa9.96□□□□□ -0.82
Pdlim5-209ENSMUST00000196908 DgkaO88673 730 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms