RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Cep135Q6P5D4 1140 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ttc8Q8VD72 515 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Dph6Q9CQ28 267 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Lamp1P11438 406 aaKnown RBP8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Setd4P58467 439 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Dhx40Q6PE54 779 aaKnown RBP8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Recql4Q75NR7 1216 aaKnown RBP8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Syt10Q9R0N4 523 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 GsdmeQ9Z2D3 512 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Herc3A6H6S0 1050 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cpb1B2RS76 415 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cavin1O54724 392 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cxcl9P18340 126 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Pik3r1P26450 724 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Stim1P70302 685 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Mcm6P97311 821 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Mettl14Q3UIK4 456 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Sh2d1b2Q45HK4 132 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Zdhhc14Q8BQQ1 489 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Mical1Q8VDP3 1048 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Mov10l1Q99MV5 1187 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 EhhadhQ9DBM2 718 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Pcdh15Q99PJ1 1943 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Pappa2E9PZ87 1789 aa8.39□□□□□ -1.07
Usp40-204ENSMUST00000187758 Rfpl4bJ3QPR6 266 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Serpinb2P12388 415 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Slc2a13Q3UHK1 637 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Usp17leQ7M764 540 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Znf618Q80YY7 953 aaKnown RBP8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Slc17a8Q8BFU8 601 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ddx19bQ8BZY3 494 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Lca5lQ8C0X0 741 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Celf2Q9Z0H4 508 aaKnown RBP8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Brpf3B2KF05 1204 aaKnown RBP8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ccnd3P30282 292 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Gm10392Q3V3I3 114 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Slc4a7Q8BTY2 1034 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 IrgqQ8VIM9 583 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Tab2Q99K90 693 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Filip1Q9CS72 1211 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Pcdh11xF6ZNL5 1338 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ccdc88cQ6VGS5 2009 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Bpifb4A2BGH0 617 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 ArP19091 899 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Erbb2P70424 1256 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Neurl1bQ0MW30 546 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Meis1Q60954 390 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Adgra1Q8C4G9 578 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Grin2dQ03391 1323 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Disp2Q8CIP5 1345 aa8.38□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cdc27A2A6Q5 825 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Itgb5O70309 798 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 EzrP26040 586 aaKnown RBP8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ssrp1Q08943 708 aaKnown RBP8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ankrd13cQ3UX43 541 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Trak2Q6P9N8 913 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ces4aQ8R0W5 563 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ushbp1Q8R370 680 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cabp5Q9JLK3 173 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Bub1bQ9Z1S0 1052 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 PatjQ63ZW7 1834 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cntnap5cQ0V8T7 1305 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 SfnO70456 248 aaKnown RBP8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 PpardP35396 440 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Nbr1P97432 988 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Tsen34Q8BMZ5 316 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ccdc113Q8C5T8 377 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Trim9Q8C7M3 817 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 PdgfdQ925I7 370 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Uchl5Q9WUP7 329 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Gm3095E9Q058 166 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Gm10436L7N1Y3 520 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Atg4cQ811C2 458 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Rhobtb2Q91V93 728 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Rassf3Q99P51 232 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Oip5A2AQ14 241 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 B020004C17RikJ3QP07 232 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Magea8O89012 320 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Kcna3P16390 528 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 4933427I04RikQ3V053 235 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 RubcnQ80U62 956 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Lrrc24Q8BHA1 521 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Slu7Q8BHJ9 585 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Nipa1Q8BHK1 323 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Ercc6lQ8BHK9 1240 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Pgm5Q8BZF8 567 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 PpatQ8CIH9 517 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cfap45Q9D9U9 551 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Kcnh7Q9ER47 1195 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Cnpy2Q9QXT0 182 aa8.37□□□□□ -1.07
Usp40-204ENSMUST00000187758 Trpm7Q923J1 1863 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Rit2P70425 217 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Gabpb2P81069 414 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Kcnb1Q03717 857 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Usp13Q5BKP2 858 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 P4ha1Q60715 534 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Trpc6Q61143 930 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Rbm12b2Q66JV4 834 aaKnown RBP8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Krt9Q6RHW0 743 aa8.36□□□□□ -1.07
Usp40-204ENSMUST00000187758 Entpd3Q8BFW6 529 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms