RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Ranbp17Q99NF8 1088 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ndufab1Q9CR21 156 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Arpp21Q9DCB4 807 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 StrcQ8VIM6 1809 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Serpina16D3Z660 418 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ttll4Q80UG8 1193 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Erlin2Q8BFZ9 340 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tmem60Q8K174 133 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Stk11Q9WTK7 436 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tnip1Q9WUU8 647 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 NpcdF8VQB8 469 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mx1P09922 631 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Hdhd2Q3UGR5 259 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Pacs2Q3V3Q7 862 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Sh3gl3Q62421 347 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Krt42Q6IFX2 452 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gpbp1Q6NXH3 473 aaKnown RBP11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Phf8Q80TJ7 1023 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ssh3Q8K330 649 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Krt78E9Q0F0 1068 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Il27raO70394 623 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Foxn3Q499D0 457 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Pcsk7Q61139 770 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mcm7Q61881 719 aaKnown RBP11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ildr1Q8CBR1 537 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Vcpip1Q8CDG3 1220 aa11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Pspc1Q8R326 523 aaKnown RBP11.89□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 JcadQ5DTX6 1320 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Myh13B1AR69 1938 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Lig3P97386 1015 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ssrp1Q08943 708 aaKnown RBP11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gm5592Q3V0A6 857 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ppp1r1bQ60829 194 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tekt3Q6X6Z7 490 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Epha10Q8BYG9 1007 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ubxn1Q922Y1 297 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Lztr1Q9CQ33 837 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Trap1Q9CQN1 706 aaKnown RBP11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 NesQ6P5H2 1864 aaKnown RBP11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Etnk2A7MCT6 385 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mum1l1Q4VA55 681 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Slc9a1Q61165 820 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Asic1Q6NXK8 526 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Cc2d1bQ8BRN9 848 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Znrd1-asQ8R0E5 213 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Eif3cQ8R1B4 911 aaKnown RBP11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Slc44a4Q91VA1 707 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Six6os1Q9CTN5 574 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Git2Q9JLQ2 708 aa11.88□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rnaseh1O70338 285 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gjc1P28229 396 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Islr2Q5RKR3 745 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 LrmpQ60664 539 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ncapg2Q6DFV1 1138 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Cep70Q6IQY5 616 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ppp2r5aQ6PD03 486 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Hook2Q7TMK6 716 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mxd3Q80US8 206 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Lrrc15Q80X72 579 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 RragaQ80X95 313 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 DlatQ8BMF4 642 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rab11fip4Q8BQP8 635 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 AopepQ8BXQ6 817 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Sgsm3Q8VCZ6 750 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tmco4Q91WU4 631 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 PdhbQ9D051 359 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 1700018B08RikQ9DA83 213 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Znf609Q8BZ47 1413 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gm28919A0A087WP35 240 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ankrd35E9Q9D8 996 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Nfil3O08750 462 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Stag2O35638 1231 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rb1P13405 921 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 GopcQ8BH60 463 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Zdhhc14Q8BQQ1 489 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Traf3ip3Q8C0G2 513 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Eif4a3Q91VC3 411 aaKnown RBP11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 MymkQ9D1N4 221 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Klc4Q9DBS5 619 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Prl2c5Q9JLV9 222 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ltn1Q6A009 1767 aa11.87□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gm1993A6X8I0 212 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 SlxD3Z347 212 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Vmn2r78K7N6U5 853 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Hnrnph1O35737 449 aaKnown RBP11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Arhgap6O54834 987 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gucy1b3O54865 620 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ftl1P29391 183 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Hnrnph2P70333 449 aaKnown RBP11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Fxr1Q61584 677 aaKnown RBP11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Parp10Q8CIE4 960 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Fermt3Q8K1B8 665 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 PfasQ5SUR0 1337 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gm36210A0A1B0GS00 229 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Kctd19Q562E2 927 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Adgra3Q7TT36 1310 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Kctd3Q8BFX3 815 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Nop9Q8BMC4 636 aaKnown RBP11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Pla2g12bQ99P27 195 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Klra17Q9JMA4 273 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms