RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 ATP2A1O14983 1001 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 MUTP22033 750 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 CDC25BP30305 580 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 EPHX2P34913 555 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 ZNF76P36508 570 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 HSD17B4P51659 736 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 MYL5Q02045 173 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 SPP2Q13103 211 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 PNOCQ13519 176 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 MORC3Q14149 939 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 KCNB1Q14721 858 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
PHGDH-215ENST00000641371 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 XRRA1Q6P2D8 792 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 USP17L6PQ6QN14 398 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 POTEDQ86YR6 584 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 MB21D1Q8N884 522 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 RPAP3Q9H6T3 665 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-215ENST00000641371 KCNMB3Q9NPA1 279 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 HOXC10Q9NYD6 342 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
PHGDH-215ENST00000641371 LOXHD1Q8IVV2 1947 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 CXCL11O14625 94 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 ADAMTS3O15072 1205 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 TDP2O95551 362 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 CFBP00751 764 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 COPB2P35606 906 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 TXKP42681 527 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 PPATQ06203 517 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 DPYDQ12882 1025 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 PABPC4Q13310 644 aaKnown RBP eCLIP10.94□□□□□ -0.66
PHGDH-215ENST00000641371 STIM1Q13586 685 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 COG2Q14746 738 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 IL17AQ16552 155 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 DPCR1Q3MIW9 517 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 HYIQ5T013 277 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 CNNM4Q6P4Q7 775 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 ARMC9Q7Z3E5 817 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 ANKRD13AQ8IZ07 590 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-215ENST00000641371 TTC12Q9H892 705 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-215ENST00000641371 EMILIN3Q9NT22 766 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 KBTBD4Q9NVX7 518 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 MAN1B1Q9UKM7 699 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 AFG3L2Q9Y4W6 797 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 ZHX2Q9Y6X8 837 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 SSC5DA1L4H1 1573 aa10.94□□□□□ -0.66
PHGDH-215ENST00000641371 SLC37A4O43826 429 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 USP2O75604 605 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 ADCY5O95622 1261 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 PTMAP06454 111 aaKnown RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 BCRP11274 1271 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 DSG3P32926 999 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 TECP42680 631 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 C11orf57Q6ZUT1 292 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 USP49Q70CQ1 688 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 SV2BQ7L1I2 683 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 ENOX1Q8TC92 643 aaKnown RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 GTF3C2Q8WUA4 911 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 MRFAP1L1Q96HT8 127 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 GLIS2Q9BZE0 524 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 WDR11Q9BZH6 1224 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-215ENST00000641371 ADAMTS5Q9UNA0 930 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 LOC285556D6RIA3 1793 aa10.93□□□□□ -0.66
PHGDH-215ENST00000641371 PTPRFP10586 1907 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 FRMPD4Q14CM0 1322 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 A0A087X0B3 334 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 VWA5AO00534 786 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 OPLAHO14841 1288 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 STAM2O75886 525 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 FKBP1BP68106 108 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 KARSQ15046 597 aaKnown RBP10.92□□□□□ -0.66
PHGDH-215ENST00000641371 COBLL1Q53SF7 1204 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 ZNF658Q5TYW1 1059 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-215ENST00000641371 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 DHX40Q8IX18 779 aaKnown RBP10.92□□□□□ -0.66
PHGDH-215ENST00000641371 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 ETNPPLQ8TBG4 499 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 NEK9Q8TD19 979 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 SNX29Q8TEQ0 813 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 ZKSCAN4Q969J2 545 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-215ENST00000641371 C7orf25Q9BPX7 421 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 TEX13BQ9BXU2 312 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 TRIM5Q9C035 493 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 FBXO28Q9NVF7 368 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
PHGDH-215ENST00000641371 ZNF536O15090 1300 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 RPTORQ8N122 1335 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 OTOFQ9HC10 1997 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PVALEFA0A1B0GWK0 134 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms