RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PCCAP05165 728 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 XBP1P17861 261 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 CTNNA1P35221 906 aaKnown RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 LIFRP42702 1097 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 IFNAR2P48551 515 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 SKOR1P84550 965 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 ADSSL1Q8N142 457 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 SPDL1Q96EA4 605 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 LBHD1Q9BQE6 289 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 CARD10Q9BWT7 1032 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 NACAP1Q9BZK3 213 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 CCDC113Q9H0I3 377 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 NIP7Q9Y221 180 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 PSMA7O14818 248 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 PDE8BO95263 885 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 SLC5A1P13866 664 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 ASIC1P78348 528 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 EMBQ6PCB8 327 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 IFT20Q8IY31 132 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 LPIN2Q92539 896 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 TMEM60Q9H2L4 133 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 GPR108Q9NPR9 543 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 COPB2P35606 906 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 MAGOHP61326 146 aaKnown RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 ALS2CLQ60I27 953 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 CACNA2D4Q7Z3S7 1137 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 MAGOHBQ96A72 148 aaKnown RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
SCARB2-227ENST00000640957 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-227ENST00000640957 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 FAM107AO95990 144 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 UBA7P41226 1012 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 SCTRP47872 440 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 DNM2P50570 870 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 SATB1Q01826 763 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 ARMC3Q5W041 872 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 RNF217Q8TC41 542 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 PRCCQ92733 491 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 ALS2CR12Q96Q35 445 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 DUSP9Q99956 384 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 THRAP3Q9Y2W1 955 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 CD2APQ9Y5K6 639 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 SEMA3EO15041 775 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 ZBED6P86452 979 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 KDM7AQ6ZMT4 941 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 NSMCE1Q8WV22 266 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 ISCA1Q9BUE6 129 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 NEUROG2Q9H2A3 272 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 GOPCQ9HD26 462 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 GMNCA6NCL1 334 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 LGR5O75473 907 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 CIAO1O76071 339 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 KIF4AO95239 1232 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 ITGB3BPQ13352 177 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 RASGRF1Q13972 1273 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 KLHDC7AQ5VTJ3 777 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 GLIS3Q8NEA6 775 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 SELENOSQ9BQE4 189 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 DDX47Q9H0S4 455 aaKnown RBP15.18■□□□□ 0.02
SCARB2-227ENST00000640957 TBC1D7Q9P0N9 293 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
SCARB2-227ENST00000640957 KCNK3O14649 394 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 GYG1P46976 350 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 KIF2BQ8N4N8 673 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 ENAHQ8N8S7 591 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-227ENST00000640957 ZBTB10Q96DT7 871 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 MLXIPLQ9NP71 852 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-227ENST00000640957 MYZAPP0CAP1 466 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 SRGNP10124 158 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 DDR1Q08345 913 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 INF2Q27J81 1249 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 RAPGEF5Q92565 580 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 FERMT2Q96AC1 680 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 PHF20Q9BVI0 1012 aa15.17■□□□□ 0.02
SCARB2-227ENST00000640957 CELF4Q9BZC1 486 aaKnown RBP15.17■□□□□ 0.02
SCARB2-227ENST00000640957 STK36Q9NRP7 1315 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 HSD17B3P37058 310 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 CFAP221Q4G0U5 840 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 NAALADL2Q58DX5 795 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 ANKRD20A8PQ5CZ79 823 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 MRC1P22897 1456 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 A8MUI8 341 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 TMCO5BA8MYB1 307 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms