RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
SPIN3-242ENST00000640577 TMX2Q9Y320 296 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 HOXA13P31271 388 aaPredicted RBP17.25■□□□□ 0.35
SPIN3-242ENST00000640577 TGFB2P61812 414 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 ASIC1P78348 528 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
SPIN3-242ENST00000640577 TMEM266Q2M3C6 531 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
SPIN3-242ENST00000640577 FAM83BQ5T0W9 1011 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 SNX29Q8TEQ0 813 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 PPP1R13BQ96KQ4 1090 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 VPS33BQ9H267 617 aa17.25■□□□□ 0.35
SPIN3-242ENST00000640577 LRRC10BA6NIK2 292 aa17.24■□□□□ 0.35
SPIN3-242ENST00000640577 PDE4DQ08499 809 aa17.24■□□□□ 0.35
SPIN3-242ENST00000640577 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
SPIN3-242ENST00000640577 TCP11X2Q5H9J9 407 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 VPS16Q9H269 839 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 KCNMB3Q9NPA1 279 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 KCNJ18B7U540 433 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 KCNJ12Q14500 433 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 CIAPIN1Q6FI81 312 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 TTI2Q6NXR4 508 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
SPIN3-242ENST00000640577 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 PCDHA12Q9UN75 941 aa17.23■□□□□ 0.35
SPIN3-242ENST00000640577 CYP3A7-CYP3A51PA0A087WV96 503 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 GCFC2P16383 781 aaKnown RBP17.22■□□□□ 0.35
SPIN3-242ENST00000640577 CYP3A7P24462 503 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 KCNJ6P48051 423 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 PRELPP51888 382 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 DUSP9Q99956 384 aaKnown RBP17.22■□□□□ 0.35
SPIN3-242ENST00000640577 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 FAM86B1E9PN63 330 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 FAM86B2P0C5J1 330 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 STAT3P40763 770 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 MMP14P50281 582 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 USP11P51784 963 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 STAT2P52630 851 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
SPIN3-242ENST00000640577 RBL2Q08999 1139 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 KRT79Q5XKE5 535 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 SV2BQ7L1I2 683 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 RAD54LQ92698 747 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 LENG9Q96B70 501 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
SPIN3-242ENST00000640577 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
SPIN3-242ENST00000640577 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPIN3-242ENST00000640577 TBC1D12O60347 775 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 CAP2P40123 477 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 CYP2W1Q8TAV3 490 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 CPLX3Q8WVH0 158 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 CDK5RAP3Q96JB5 506 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 CTAGE1Q96RT6 745 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 PDCL3Q9H2J4 239 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
SPIN3-242ENST00000640577 RNF225M0QZC1 329 aaPredicted RBP17.21■□□□□ 0.35
SPIN3-242ENST00000640577 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 PRR16Q569H4 304 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 CCDC112Q8NEF3 446 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 BAG1Q99933 345 aaPredicted RBP17.21■□□□□ 0.35
SPIN3-242ENST00000640577 SRRTQ9BXP5 876 aaKnown RBP17.21■□□□□ 0.35
SPIN3-242ENST00000640577 RAB34Q9BZG1 259 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 SYNPO2Q9UMS6 1093 aa17.21■□□□□ 0.35
SPIN3-242ENST00000640577 H7C1D1 291 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 N4BP3O15049 544 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 GTF2F1P35269 517 aaKnown RBP eCLIP17.2■□□□□ 0.34
SPIN3-242ENST00000640577 ANKRD40Q6AI12 368 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 ETNPPLQ8TBG4 499 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 PSMA7O14818 248 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 MARCH6O60337 910 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 GYPCP04921 128 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 AMPD3Q01432 767 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 SPIRE1Q08AE8 756 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 RASA3Q14644 834 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 CCDC174Q6PII3 467 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
SPIN3-242ENST00000640577 FBXO41Q8TF61 875 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 KIFC2Q96AC6 838 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 TEPSINQ96N21 525 aa17.2■□□□□ 0.34
SPIN3-242ENST00000640577 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms