RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 CFBP00751 764 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 TIMP1P01033 207 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 EPHB4P54760 987 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 TROAPQ12815 778 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 BMP2KLQ5H9B9 411 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 COPS5Q92905 334 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
HNRNPU-229ENST00000640440 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 OPLAHO14841 1288 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 SLC27A2O14975 620 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.273e-9■□□□□ 9
HNRNPU-229ENST00000640440 ARIH2O95376 493 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 MYL3P08590 195 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 TXNP10599 105 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 EIF2AK2P19525 551 aaKnown RBP16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 CPT1AP50416 773 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 ARHGEF16Q5VV41 709 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 SEPT14Q6ZU15 432 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 PIGSQ96S52 555 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 LY9Q9HBG7 655 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 GPHNQ9NQX3 736 aaPredicted RBP16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 PCDHA1Q9Y5I3 950 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 SCN5AQ14524 2016 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 DOCK5Q9H7D0 1870 aa16.73■□□□□ 0.27
HNRNPU-229ENST00000640440 PRC1O43663 620 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 CYTH3O43739 400 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 CD4P01730 458 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 HSD17B4P51659 736 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 ZNF654Q8IZM8 581 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 MYL10Q9BUA6 226 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 RIOX1Q9H6W3 641 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 POLR3EQ9NVU0 708 aa16.72■□□□□ 0.27
HNRNPU-229ENST00000640440 GBF1Q92538 1859 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 B4GALT4O60513 344 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 HOXA13P31271 388 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 MCM5P33992 734 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 PURAQ00577 322 aaKnown RBP16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 COL9A3Q14050 684 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 STXBP2Q15833 593 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 BRDTQ58F21 947 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 MFSD5Q6N075 450 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 PIBF1Q8WXW3 757 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
HNRNPU-229ENST00000640440 SH2B2O14492 632 aaPredicted RBP16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 DDAH1O94760 285 aa16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 CYP2C18P33260 490 aa16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 GHRHRQ02643 423 aa16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 SEZ6LQ9BYH1 1024 aa16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 TET1Q8NFU7 2136 aa16.7■□□□□ 0.26
HNRNPU-229ENST00000640440 TANC1Q9C0D5 1861 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 CDH23Q9H251 3354 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 NR3C2P08235 984 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 CSF2RAP15509 400 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 TRAF1Q13077 416 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 PPIGQ13427 754 aaKnown RBP eCLIP16.69■□□□□ 0.267e-28■□□□□ 8.9
HNRNPU-229ENST00000640440 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 CCDC62Q6P9F0 684 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 TMEM199Q8N511 208 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 TMEM87BQ96K49 555 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 HIPK3Q9H422 1215 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 TRMT13Q9NUP7 481 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 MTMR10Q9NXD2 777 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 UMODL1Q5DID0 1318 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 KAT6AQ92794 2004 aa16.69■□□□□ 0.26
HNRNPU-229ENST00000640440 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 A6NJR5 290 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 GH1P01241 217 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 MYCLP12524 364 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 KIF5BP33176 963 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 ZNF697Q5TEC3 545 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 PPP1R13LQ8WUF5 828 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 FAM161BQ96MY7 647 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.68■□□□□ 0.267e-10■■□□□ 11.6
HNRNPU-229ENST00000640440 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 CUL9Q8IWT3 2517 aa16.68■□□□□ 0.26
HNRNPU-229ENST00000640440 GCOM1H8Y6P7 765 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms