RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 TMEM169Q96HH4 297 aa8.22□□□□□ -1.09
RTTN-217ENST00000640393 INTS4Q96HW7 963 aaKnown RBP8.22□□□□□ -1.09
RTTN-217ENST00000640393 KRTAP4-6Q9BYQ5 205 aa8.22□□□□□ -1.09
RTTN-217ENST00000640393 CLDND1Q9NY35 253 aa8.22□□□□□ -1.09
RTTN-217ENST00000640393 PPARGC1AQ9UBK2 798 aaKnown RBP8.22□□□□□ -1.09
RTTN-217ENST00000640393 PCDHA9Q9Y5H5 950 aa8.22□□□□□ -1.09
RTTN-217ENST00000640393 C6orf222P0C671 652 aaPredicted RBP8.21□□□□□ -1.1
RTTN-217ENST00000640393 LSAMPQ13449 338 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 MLANAQ16655 118 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 ZC3H12BQ5HYM0 836 aaKnown RBP8.21□□□□□ -1.1
RTTN-217ENST00000640393 ZNF605Q86T29 641 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 MTDHQ86UE4 582 aaKnown RBP8.21□□□□□ -1.1
RTTN-217ENST00000640393 HOMER1Q86YM7 354 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 IFNL3Q8IZI9 196 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 NLGN2Q8NFZ4 835 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 APPBP2Q92624 585 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 PTPRN2Q92932 1015 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 KCNJ15Q99712 375 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 JAM3Q9BX67 310 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 CRTAC1Q9NQ79 661 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 GPR27Q9NS67 375 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 DBR1Q9UK59 544 aaKnown RBP8.21□□□□□ -1.1
RTTN-217ENST00000640393 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
RTTN-217ENST00000640393 PCDHA8Q9Y5H6 950 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 NPFFR2Q9Y5X5 522 aa8.21□□□□□ -1.1
RTTN-217ENST00000640393 ZC3H12DA2A288 527 aaKnown RBP8.2□□□□□ -1.1
RTTN-217ENST00000640393 SMARCA5O60264 1052 aaPredicted RBP8.2□□□□□ -1.1
RTTN-217ENST00000640393 NTRK1P04629 796 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 RAB3GAP1Q15042 981 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 STYK1Q6J9G0 422 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 MTA3Q9BTC8 594 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 SLC6A17Q9H1V8 727 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 NSUN3Q9H649 340 aaKnown RBP8.2□□□□□ -1.1
RTTN-217ENST00000640393 TMEM260Q9NX78 707 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 TBX22Q9Y458 520 aa8.2□□□□□ -1.1
RTTN-217ENST00000640393 LRRC10BA6NIK2 292 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.19□□□□□ -1.1
RTTN-217ENST00000640393 F8W031 263 aaPredicted RBP8.19□□□□□ -1.1
RTTN-217ENST00000640393 MPOP05164 745 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 SRGAP2CP0DJJ0 459 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 GABREP78334 506 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 GUCY1A3Q02108 690 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 MCTP1Q6DN14 999 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 SLC7A14Q8TBB6 771 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.19□□□□□ -1.1
RTTN-217ENST00000640393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.19□□□□□ -1.1
RTTN-217ENST00000640393 SIT1Q9Y3P8 196 aa8.19□□□□□ -1.1
RTTN-217ENST00000640393 CCDC163A0A0D9SF12 145 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 OR14I1A6ND48 311 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 CDC45O75419 566 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 CRTAMO95727 393 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 GTF2A2P52657 109 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 CORO7P57737 925 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 CABP7Q86V35 215 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 NLGN1Q8N2Q7 840 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 NCOA5Q9HCD5 579 aaKnown RBP8.18□□□□□ -1.1
RTTN-217ENST00000640393 CD2APQ9Y5K6 639 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 HCFC2Q9Y5Z7 792 aa8.18□□□□□ -1.1
RTTN-217ENST00000640393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
RTTN-217ENST00000640393 GPR85P60893 370 aa8.17□□□□□ -1.1
RTTN-217ENST00000640393 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
RTTN-217ENST00000640393 TMEM132EQ6IEE7 984 aa8.17□□□□□ -1.1
RTTN-217ENST00000640393 SDE2Q6IQ49 451 aa8.17□□□□□ -1.1
RTTN-217ENST00000640393 RSPO2Q6UXX9 243 aaPredicted RBP8.17□□□□□ -1.1
RTTN-217ENST00000640393 NLRP10Q86W26 655 aa8.17□□□□□ -1.1
RTTN-217ENST00000640393 DCP1AQ9NPI6 582 aaPredicted RBP8.17□□□□□ -1.1
RTTN-217ENST00000640393 SFMBT1Q9UHJ3 866 aa8.17□□□□□ -1.1
RTTN-217ENST00000640393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.16□□□□□ -1.1
RTTN-217ENST00000640393 AQP7O14520 342 aa8.16□□□□□ -1.1
RTTN-217ENST00000640393 DBHP09172 617 aa8.16□□□□□ -1.1
RTTN-217ENST00000640393 TESK1Q15569 626 aa8.16□□□□□ -1.1
RTTN-217ENST00000640393 MAMDC2Q7Z304 686 aaPredicted RBP8.16□□□□□ -1.1
RTTN-217ENST00000640393 MAGEB10Q96LZ2 347 aaPredicted RBP8.16□□□□□ -1.1
RTTN-217ENST00000640393 BCAS3Q9H6U6 928 aa8.16□□□□□ -1.1
RTTN-217ENST00000640393 TNFRSF12AQ9NP84 129 aa8.16□□□□□ -1.1
RTTN-217ENST00000640393 COA3Q9Y2R0 106 aaPredicted RBP8.16□□□□□ -1.1
RTTN-217ENST00000640393 RASGRP1O95267 797 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 SOD2P04179 222 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 COL6A2P12110 1019 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 TCEA2Q15560 299 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 C16orf86Q6ZW13 317 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 FGD2Q7Z6J4 655 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 IPPKQ9H8X2 491 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 KLHL14Q9P2G3 628 aa8.15□□□□□ -1.1
RTTN-217ENST00000640393 PLD2O14939 933 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 GLI4P10075 376 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 ERVFRD-1P60508 538 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 KIZQ2M2Z5 673 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 WWC2Q6AWC2 1192 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 PAQR3Q6TCH7 311 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 RPTNQ6XPR3 784 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 BRAPQ7Z569 592 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 ZC3H7AQ8IWR0 971 aaKnown RBP8.14□□□□□ -1.11
RTTN-217ENST00000640393 ZFYVE21Q9BQ24 234 aa8.14□□□□□ -1.11
RTTN-217ENST00000640393 FAM53CQ9NYF3 392 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms