RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	MRRF	Q96E11	262 aa	Known RBP	13.36	□□□□□ -0.27
PXN-222	ENST00000637624	ATP6V1G3	Q96LB4	118 aa		13.36	□□□□□ -0.27
PXN-222	ENST00000637624	RAB34	Q9BZG1	259 aa		13.36	□□□□□ -0.27
PXN-222	ENST00000637624	NUCKS1	Q9H1E3	243 aa	Known RBP	13.36	□□□□□ -0.27
PXN-222	ENST00000637624	ARMT1	Q9H993	441 aa		13.36	□□□□□ -0.27
PXN-222	ENST00000637624	RBM5	P52756	815 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	CALCOCO2	Q13137	446 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	C6orf163	Q5TEZ5	329 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	USP49	Q70CQ1	688 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	MIEF2	Q96C03	454 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	KCND1	Q9NSA2	647 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	DMGDH	Q9UI17	866 aa	Known RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	STX8	Q9UNK0	236 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624		H0Y3Z8	333 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	GTPBP6	O43824	516 aa	Predicted RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	ALDH3A1	P30838	453 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	ILDR1	Q86SU0	546 aa	Predicted RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	SYNE4	Q8N205	404 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	MKNK2	Q9HBH9	465 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	COPRS	Q9NQ92	184 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	KLHL14	Q9P2G3	628 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	ADD3	Q9UEY8	706 aa	Known RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624		A0A0G2JLW4	131 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	NBPF26	B4DH59	902 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	ACTN4	O43707	911 aa	Known RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	LRRC24	Q50LG9	513 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	NBPF10	Q6P3W6	841 aa	Known RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	NBPF15	Q8N660	670 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	CNOT6L	Q96LI5	555 aa	Known RBP	13.35	□□□□□ -0.27
PXN-222	ENST00000637624	USH1C	Q9Y6N9	552 aa		13.35	□□□□□ -0.27
PXN-222	ENST00000637624	PHF20L1	A8MW92	1017 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	SNAP23	O00161	211 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	IRS4	O14654	1257 aa	Predicted RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	MYBL1	P10243	752 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	ZBED6	P86452	979 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	TAOK1	Q7L7X3	1001 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	ARMC9	Q7Z3E5	817 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	OSBPL9	Q96SU4	736 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624		F8W031	263 aa	Predicted RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	EVI5	O60447	810 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	CYP7A1	P22680	504 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	EZH2	Q15910	746 aa	Known RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	LRRC23	Q53EV4	343 aa	Predicted RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	SFMBT2	Q5VUG0	894 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	PI16	Q6UXB8	463 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	MB21D1	Q8N884	522 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	RTCB	Q9Y3I0	505 aa	Known RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	ABCA3	Q99758	1704 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	ANO9	A1A5B4	782 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	STX2	P32856	288 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	KIF11	P52732	1056 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	SMTN	P53814	917 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	LETM2	Q2VYF4	491 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	OR2W6P	Q8NHA6	318 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	WHAMM	Q8TF30	809 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	CYFIP2	Q96F07	1278 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	AP1M1	Q9BXS5	423 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	EHD2	Q9NZN4	543 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	PCDHA13	Q9Y5I0	950 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	SRPRB	Q9Y5M8	271 aa	Known RBP	13.34	□□□□□ -0.27
PXN-222	ENST00000637624	BCL9	O00512	1426 aa		13.34	□□□□□ -0.27
PXN-222	ENST00000637624	C6orf229	H3BNL8	230 aa		13.33	□□□□□ -0.27
PXN-222	ENST00000637624	SUN1	O94901	812 aa		13.33	□□□□□ -0.27
PXN-222	ENST00000637624	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.33	□□□□□ -0.27
PXN-222	ENST00000637624	MYCBPAP	Q8TBZ2	947 aa		13.33	□□□□□ -0.27
PXN-222	ENST00000637624	KAT2B	Q92831	832 aa		13.33	□□□□□ -0.27
PXN-222	ENST00000637624	SEC63	Q9UGP8	760 aa	Known RBP	13.33	□□□□□ -0.27
PXN-222	ENST00000637624	CYP19A1	P11511	503 aa	Predicted RBP	13.33	□□□□□ -0.28
PXN-222	ENST00000637624	ZNF654	Q8IZM8	581 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	PLBD2	Q8NHP8	589 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	HOMER3	Q9NSC5	361 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	FAM53C	Q9NYF3	392 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	RPS6KA5	O75582	802 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	MMP1	P03956	469 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	RFC4	P35249	363 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	CARS	P49589	748 aa	Known RBP	13.33	□□□□□ -0.28
PXN-222	ENST00000637624	EPHA10	Q5JZY3	1008 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	SEPT14	Q6ZU15	432 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	CCDC77	Q9BR77	488 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	ZNF532	Q9HCE3	1301 aa		13.33	□□□□□ -0.28
PXN-222	ENST00000637624	FAM208A	Q9UK61	1670 aa	Known RBP	13.33	□□□□□ -0.28
PXN-222	ENST00000637624	SYF2	O95926	243 aa	Known RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SLC5A1	P13866	664 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	ITPK1	Q13572	414 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	PTGIS	Q16647	500 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	MCUR1	Q96AQ8	359 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	MS4A14	Q96JA4	679 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	FAM107A	O95990	144 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	MME	P08473	750 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SETSIP	P0DME0	302 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	CDC25C	P30307	473 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	ERVK-24	P63145	666 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	PTPN12	Q05209	780 aa	Known RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	GRIN1	Q05586	938 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	IK	Q13123	557 aa	Predicted RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	ASIC2	Q16515	512 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	FANCB	Q8NB91	859 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	FAM114A2	Q9NRY5	505 aa		13.32	□□□□□ -0.28

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