RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 PATL1Q86TB9 770 aaKnown RBP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 SIX6OS1Q8N1H7 587 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 TTC39CQ8N584 583 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 GDAP1Q8TB36 358 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 TCP11Q8WWU5 503 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 GDAP1L1Q96MZ0 367 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 NUDCD1Q96RS6 583 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 SUCLA2Q9P2R7 463 aaPredicted RBP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 PCDHA12Q9UN75 941 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 ATP7BP35670 1465 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 MYO3BQ8WXR4 1341 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 EVI5O60447 810 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 GIPC2Q8TF65 315 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 SLC7A5P2Q9GIP4 190 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 TSPYL2Q9H2G4 693 aaPredicted RBP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 SLC38A10Q9HBR0 1119 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 EPS15L1Q9UBC2 864 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 JAG2Q9Y219 1238 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 HSPA6P17066 643 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 STX2P32856 288 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 CCDC15Q0P6D6 951 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 ZSCAN23Q3MJ62 389 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 MMEL1Q495T6 779 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 NXNQ6DKJ4 435 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 TTBK2Q6IQ55 1244 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 AFAP1L1Q8TED9 768 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 VPS39Q96JC1 886 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 DDX50Q9BQ39 737 aaKnown RBP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 LBHD1Q9BQE6 289 aaPredicted RBP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 FTOQ9C0B1 505 aaKnown RBP eCLIP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 TRPV6Q9H1D0 765 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 TMEM206Q9H813 350 aa6.88□□□□□ -1.31
GABRB3-218ENST00000635994 ZHX1Q9UKY1 873 aaPredicted RBP6.88□□□□□ -1.31
GABRB3-218ENST00000635994 IQCA1LA6NCM1 817 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 NVLO15381 856 aaKnown RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PIK3CAP42336 1068 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PRKCQQ04759 706 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 MFSD14CQ5VZR4 134 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 NEK8Q86SG6 692 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 LZICQ8WZA0 190 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 TSC1Q92574 1164 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 DSCC1Q9BVC3 393 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 RIPOR2Q9Y4F9 1068 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 MAP3K19Q56UN5 1328 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 C1orf167Q5SNV9 1468 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 LAMC1P11047 1609 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 IFNB1P01574 187 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 NOLC1Q14978 699 aaKnown RBP eCLIP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 LONRF2Q1L5Z9 754 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ANKRD20A4Q4UJ75 823 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ANKRD20A8PQ5CZ79 823 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ANKRD20A2Q5SQ80 823 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ANKRD20A1Q5TYW2 823 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 TBC1D32Q96NH3 1257 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 LRRC37BQ96QE4 947 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 KANSL2Q9H9L4 492 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 TOPORSQ9NS56 1045 aaPredicted RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 MYO1AQ9UBC5 1043 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 TCP10L2B9ZVM9 353 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PPEF1O14829 653 aaPredicted RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PHEXP78562 749 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 TNFAIP2Q03169 654 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 KARSQ15046 597 aaKnown RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 CDC37Q16543 378 aaPredicted RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 CWF19L2Q2TBE0 894 aaKnown RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 HSP90AA5PQ58FG0 334 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 HSP90AA4PQ58FG1 418 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 RNF10Q8N5U6 811 aaKnown RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 TRIM58Q8NG06 486 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ZBTB18Q99592 522 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 CENPKQ9BS16 269 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 KLHL14Q9P2G3 628 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 IQGAP1P46940 1657 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ATP10DQ9P241 1426 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 H7C0C1 242 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ATP5OP48047 213 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PDE1BQ01064 536 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PPARAQ07869 468 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 VPS72Q15906 364 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ARHGAP44Q17R89 818 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 ACBD5Q5T8D3 534 aaPredicted RBP6.87□□□□□ -1.31
GABRB3-218ENST00000635994 CIAPIN1Q6FI81 312 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 SLFN12LQ6IEE8 588 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 KLC3Q6P597 504 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 PDXDC1Q6P996 788 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 EYA1Q99502 592 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 VPS16Q9H269 839 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 NEUROG2Q9H2A3 272 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 KDRP35968 1356 aa6.87□□□□□ -1.31
GABRB3-218ENST00000635994 DCCP43146 1447 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 CCDC151A5D8V7 595 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 INO80B-WBP1J3KQ70 363 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 SRGAP2CP0DJJ0 459 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 ZNF18P17022 549 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 PAMP19021 973 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 AK2P54819 239 aa6.86□□□□□ -1.31
GABRB3-218ENST00000635994 CEP85Q6P2H3 762 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms