RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 FGD4Q96M96 766 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 TEPSINQ96N21 525 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 SGPP1Q9BX95 441 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 XYLT2Q9H1B5 865 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 LUC7LQ9NQ29 371 aaKnown RBP3.89□□□□□ -1.79
PSPC1-208ENST00000635562 ARHGEF4Q9NR80 690 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 FAM86C1Q9NVL1 165 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 EMC9Q9Y3B6 208 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 PCDHB12Q9Y5F1 795 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 FHOD1Q9Y613 1164 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 TAF6LQ9Y6J9 622 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 KDM2BQ8NHM5 1336 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 ESYT3A0FGR9 886 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 IQCA1LA6NCM1 817 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 NOTOA8MTQ0 251 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 SIGLEC6O43699 453 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 MAP4K4O95819 1239 aaPredicted RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 ITGAVP06756 1048 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 FAM153BP0C7A2 387 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 HSD3B2P26439 372 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 RTP1P59025 263 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 SSRP1Q08945 709 aaKnown RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 CNKSR3Q6P9H4 555 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 PRRT2Q7Z6L0 340 aaPredicted RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 ZNF227Q86WZ6 799 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 TRIM59Q8IWR1 403 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 LRRC47Q8N1G4 583 aaKnown RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 USHBP1Q8N6Y0 703 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 ZBTB38Q8NAP3 1195 aaPredicted RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 BVESQ8NE79 360 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 MZB1Q8WU39 189 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 KISS1RQ969F8 398 aaPredicted RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 GBP3Q9H0R5 595 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 PFDN2Q9UHV9 154 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 CNOT11Q9UKZ1 510 aaKnown RBP3.88□□□□□ -1.79
PSPC1-208ENST00000635562 PTCH2Q9Y6C5 1203 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 SBNO2Q9Y2G9 1366 aa3.88□□□□□ -1.79
PSPC1-208ENST00000635562 A0A1W2PQ45 241 aaPredicted RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 A0A1W2PQY0 241 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 TMEM82A0PJX8 343 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 TBX1O43435 398 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 EIF3JO75822 258 aaKnown RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 SYPP08247 313 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 ADRB1P08588 477 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 ITGA4P13612 1032 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 CTSKP43235 329 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 PPP2R2AP63151 447 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 RBM10P98175 930 aaKnown RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 CYP4F3Q08477 520 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 GRB10Q13322 594 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 ZC3H12BQ5HYM0 836 aaKnown RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 FOXB2Q5VYV0 432 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 FAM43BQ6ZT52 329 aaPredicted RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 FRMD5Q7Z6J6 570 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 KIAA0907Q7Z7F0 614 aaPredicted RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 SIRT2Q8IXJ6 389 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 LINC01356Q8N9X3 169 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 HHIPL1Q96JK4 782 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 LGR4Q9BXB1 951 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 FOXP3Q9BZS1 431 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 CNTD2Q9H8S5 307 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 GFOD1Q9NXC2 390 aa3.87□□□□□ -1.79
PSPC1-208ENST00000635562 CGGBP1Q9UFW8 167 aaPredicted RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 DIS3Q9Y2L1 958 aaKnown RBP3.87□□□□□ -1.79
PSPC1-208ENST00000635562 PPFIA4O75335 1185 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 PEX14O75381 377 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 PPM1BO75688 479 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 PRAMEF1O95521 474 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 FGFR1P11362 822 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 EPHB3P54753 998 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 SPATS1Q496A3 300 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 SV2CQ496J9 727 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 FAM129CQ86XR2 697 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 FIBCD1Q8N539 461 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 ZSWIM2Q8NEG5 633 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 APPBP2Q92624 585 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 BRF1Q92994 677 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 EVI5LQ96CN4 794 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 GPATCH3Q96I76 525 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 EXOC2Q96KP1 924 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 MCMBPQ9BTE3 642 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 AARSD1Q9BTE6 412 aaKnown RBP3.86□□□□□ -1.79
PSPC1-208ENST00000635562 CHST7Q9NS84 486 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 FANCLQ9NW38 375 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 FBXL21Q9UKT6 434 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 MINPP1Q9UNW1 487 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 CLSPNQ9HAW4 1339 aa3.86□□□□□ -1.79
PSPC1-208ENST00000635562 TRAV20A0A0B4J274 112 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 CCDC163A0A0D9SF12 145 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 OTOL1A6NHN0 477 aaPredicted RBP3.85□□□□□ -1.79
PSPC1-208ENST00000635562 FADS2P1A8MWK0 482 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 AGRPO00253 132 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 PARNO95453 639 aaKnown RBP3.85□□□□□ -1.79
PSPC1-208ENST00000635562 SCG5P05408 212 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 PTMAP06454 111 aaKnown RBP3.85□□□□□ -1.79
PSPC1-208ENST00000635562 PFKLP17858 780 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 BMP8BP34820 402 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 GRIA2P42262 883 aa3.85□□□□□ -1.79
PSPC1-208ENST00000635562 CDR1P51861 262 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms