RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
TP53-228ENST00000635293 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
TP53-228ENST00000635293 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 VCAM1P19320 739 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 BMP6P22004 513 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 ERCC5P28715 1186 aaPredicted RBP13.12□□□□□ -0.31
TP53-228ENST00000635293 TECP42680 631 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 TXKP42681 527 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 BACE1P56817 501 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 MTMR2Q13614 643 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 NCAPHQ15003 741 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 Q4G0T1 1027 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 SAMD3Q8N6K7 520 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
TP53-228ENST00000635293 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
TP53-228ENST00000635293 KCNMB3Q9NPA1 279 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
TP53-228ENST00000635293 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 PTPRAP18433 802 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 PLCG1P19174 1290 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 TERF1P54274 439 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 GHRHRQ02643 423 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
TP53-228ENST00000635293 MARCH6O60337 910 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 CDC25AP30304 524 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 HAS1Q92839 578 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 MTRQ99707 1265 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 CCPG1Q9ULG6 757 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 PPP1R9AQ9ULJ8 1098 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 RABGAP1Q9Y3P9 1069 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
TP53-228ENST00000635293 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 AMPD3Q01432 767 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 KCNB1Q14721 858 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.1□□□□□ -0.317e-7■■□□□ 13
TP53-228ENST00000635293 ENOX1Q8TC92 643 aaKnown RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 DCPSQ96C86 337 aaKnown RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 P2RX7Q99572 595 aaKnown RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 RPAP3Q9H6T3 665 aaPredicted RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
TP53-228ENST00000635293 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
TP53-228ENST00000635293 ZNF536O15090 1300 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 FLOT1O75955 427 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 CFBP00751 764 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
TP53-228ENST00000635293 TPM2P07951 284 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 HOXA7P31268 230 aaPredicted RBP13.09□□□□□ -0.31
TP53-228ENST00000635293 SPP2Q13103 211 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 CUL4BQ13620 913 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 HYIQ5T013 277 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 SNX29Q8TEQ0 813 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
TP53-228ENST00000635293 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
TP53-228ENST00000635293 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
TP53-228ENST00000635293 POTEMA6NI47 508 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 TAL1P17542 331 aaPredicted RBP13.08□□□□□ -0.32
TP53-228ENST00000635293 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
TP53-228ENST00000635293 HSD17B4P51659 736 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 GRB10Q13322 594 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 ZNF658Q5TYW1 1059 aaPredicted RBP13.08□□□□□ -0.32
TP53-228ENST00000635293 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.32
TP53-228ENST00000635293 LENG9Q96B70 501 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 C7orf25Q9BPX7 421 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 LRRC27Q9C0I9 530 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 NT5C3AQ9H0P0 336 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 MYPNQ86TC9 1320 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 ZBED4O75132 1171 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 OAZ1P54368 228 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 PRAMEF18Q5VWM3 479 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 HAUS3Q68CZ6 603 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
TP53-228ENST00000635293 STAMQ92783 540 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 PNMA5Q96PV4 448 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 BLZF1Q9H2G9 400 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
TP53-228ENST00000635293 ZHX2Q9Y6X8 837 aa13.08□□□□□ -0.32
TP53-228ENST00000635293 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
TP53-228ENST00000635293 CASP1P29466 404 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms