RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 JMJD4Q9H9V9 463 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 GOLGA6AQ9NYA3 693 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 FARP1Q9Y4F1 1045 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 MRPL42Q9Y6G3 142 aaKnown RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 A0A087X0B3 334 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 YDJCA8MPS7 323 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 EEF2P13639 858 aaKnown RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 DPEP1P16444 411 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 SLC1A4P43007 532 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 ICA1Q05084 483 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 IL17AQ16552 155 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 PLEKHG6Q3KR16 790 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 FKBP1CQ5VVH2 108 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 LRRC8AQ8IWT6 810 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 GMCL1P1Q8NEA9 526 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 AGBL3Q8NEM8 1001 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 TBCKQ8TEA7 893 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 CCDC47Q96A33 483 aaKnown RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 XPO4Q9C0E2 1151 aaKnown RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 DISC1Q9NRI5 854 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 MAGEC2Q9UBF1 373 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 BIN2Q9UBW5 565 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 CFAP69A5D8W1 941 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 ADAMTS3O15072 1205 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 SPDYE6P0CI01 402 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 CACNB3P54284 484 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 TMEM266Q2M3C6 531 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 JAKMIP3Q5VZ66 844 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 PDXDC2PQ6P474 469 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 SH3BP5LQ7L8J4 393 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 NIM1KQ8IY84 436 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 GRAMD1CQ8IYS0 662 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 FAM151AQ8WW52 585 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 COA7Q96BR5 231 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 GMCL1Q96IK5 515 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 PRMT6Q96LA8 375 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-230ENST00000634433 IRF2BPLQ9H1B7 796 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 DNAJC18Q9H819 358 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 ARHGEF10LQ9HCE6 1279 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 PIM2Q9P1W9 311 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 ZNRF3Q9ULT6 936 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 PSMD14O00487 310 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 IRF6O14896 467 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 GCFC2P16383 781 aaKnown RBP8.04□□□□□ -1.12
BRCA1-230ENST00000634433 BMP6P22004 513 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 AMPD3Q01432 767 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 BIRC2Q13490 618 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 SPATA1Q5VX52 437 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 FILIP1Q7Z7B0 1213 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 CALML4Q96GE6 196 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
BRCA1-230ENST00000634433 CSRNP1Q96S65 589 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 GMLQ99445 158 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 TMEM60Q9H2L4 133 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 FANCLQ9NW38 375 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 FBXO9Q9UK97 447 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-230ENST00000634433 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 SCN9AQ15858 1988 aa8.04□□□□□ -1.12
BRCA1-230ENST00000634433 TPM2P07951 284 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 KCNA3P22001 575 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 HOXA7P31268 230 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 TNNI2P48788 182 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 PDIA5Q14554 519 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 SEPT2Q15019 361 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 PPP4R3AQ6IN85 833 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 KCTD1Q719H9 257 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 RASGRP2Q7LDG7 609 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 TMC6Q7Z403 805 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 CABP7Q86V35 215 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 CACTINQ8WUQ7 758 aaKnown RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 CTAGE1Q96RT6 745 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF277Q9NRM2 450 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF70Q9UC06 446 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 PYCARDQ9ULZ3 195 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 NFE2L3Q9Y4A8 694 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 GREB1LQ9C091 1923 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 F5H6K3 240 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 RAD17O75943 681 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 PPP1R2P41236 205 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 KLRC3Q07444 240 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 STIM1Q13586 685 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 KCNB1Q14721 858 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 KARSQ15046 597 aaKnown RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 CALCRLQ16602 461 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 TPD52L1Q16890 204 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 CLEC10AQ8IUN9 316 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 LRRC27Q9C0I9 530 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 HSD3B7Q9H2F3 369 aa8.03□□□□□ -1.12
BRCA1-230ENST00000634433 DICER1Q9UPY3 1922 aaKnown RBP8.03□□□□□ -1.12
BRCA1-230ENST00000634433 USP17L10C9JJH3 530 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 SLC26A4O43511 780 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 BMP3P12645 472 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms