RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 TBC1D22AQ8WUA7 517 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 DVL3Q92997 716 aaPredicted RBP2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 PDLIM2Q96JY6 352 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 TMEM87BQ96K49 555 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 DRC1Q96MC2 740 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 SAMD11Q96NU1 681 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 STK31Q9BXU1 1019 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 CXorf56Q9H5V9 222 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 TOMM22Q9NS69 142 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 SPATS2LQ9NUQ6 558 aaKnown RBP2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 SPTLC3Q9NUV7 552 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 IFT57Q9NWB7 429 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 KCNG1Q9UIX4 513 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 ZMYM5Q9UJ78 669 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 DDX41Q9UJV9 622 aaKnown RBP2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 ANAPC4Q9UJX5 808 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 MYO6Q9UM54 1294 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 ATP6V1DQ9Y5K8 247 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 PMF1-BGLAPU3KQ54 211 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 FMN1Q68DA7 1419 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 KIF27Q86VH2 1401 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 MIA2Q96PC5 1412 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 RAD50Q92878 1312 aa2.41□□□□□ -2.02
SPTAN1-216ENST00000629047 ABCC8Q09428 1581 aa2.4□□□□□ -2.02
SPTAN1-216ENST00000629047 ARHGAP35Q9NRY4 1499 aa2.4□□□□□ -2.02
SPTAN1-216ENST00000629047 PRDM2Q13029 1718 aa2.4□□□□□ -2.02
SPTAN1-216ENST00000629047 NPC1L1Q9UHC9 1359 aa2.4□□□□□ -2.02
SPTAN1-216ENST00000629047 GOLGA6L4A6NEF3 574 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 UPK3BL1B0FP48 263 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 UPK3BL2E5RIL1 263 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 MYO1CO00159 1063 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 CTIFO43310 598 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 PLIN1O60240 522 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 IGSF3O75054 1194 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 KIAA0754O94854 1291 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 BAG4O95429 457 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 PGRP06401 933 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 CYP2C19P33261 490 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 MCM2P49736 904 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 MNAT1P51948 309 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 EIF5P55010 431 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 HNRNPH2P55795 449 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 TUBB4BP68371 445 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 HTRA3P83110 453 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 SF3B2Q13435 895 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 SEPT6Q14141 434 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 NEDD9Q14511 834 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ICAM4Q14773 271 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 PDCD2Q16342 344 aaPredicted RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ZSCAN26Q16670 478 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 HSF5Q4G112 596 aaPredicted RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 WWC2Q6AWC2 1192 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 MMS22LQ6ZRQ5 1243 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 CLEC17AQ6ZS10 378 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 HDXQ7Z353 690 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 SAPCD2Q86UD0 394 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ANKRD18AQ8IVF6 992 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC50Q8IVM0 306 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 SUGP1Q8IWZ8 645 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 MRPL41Q8IXM3 137 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 EFCAB13Q8IY85 973 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 TTC9BQ8N6N2 239 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 JMYQ8N9B5 988 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 MIPOL1Q8TD10 442 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ITFG2Q969R8 447 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ACSF2Q96CM8 615 aaPredicted RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ERO1AQ96HE7 468 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 COX4I2Q96KJ9 171 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 SH3GL3Q99963 347 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 UTP14AQ9BVJ6 771 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 PANK3Q9H999 370 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 TNFRSF12AQ9NP84 129 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 USP25Q9UHP3 1055 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 CTNNA3Q9UI47 895 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 CEP131Q9UPN4 1083 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 GPR55Q9Y2T6 319 aaPredicted RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 RRP15Q9Y3B9 282 aaKnown RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 ZMYM4Q5VZL5 1548 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 KIF7Q2M1P5 1343 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 IRS2Q9Y4H2 1338 aa2.4□□□□□ -2.03
SPTAN1-216ENST00000629047 UHRF1BP1LA0JNW5 1464 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 LRPPRCP42704 1394 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 RBM47A0AV96 593 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ZBTB7CA1YPR0 619 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ANKRD18BA2A2Z9 1011 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PLEKHD1A6NEE1 506 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 GOLGA6L9A6NEM1 432 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 TMEM88BA6NKF7 163 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 HMGB1P1B2RPK0 211 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 GOLGA6L19H0YKK7 550 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 H3BRB1 525 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PRPF40AO75400 957 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ERLIN1O75477 346 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 NEBLO76041 1014 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 SLU7O95391 586 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PLATP00750 562 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 MPOP05164 745 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms