RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ASB14A6NK59 587 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 DNM1LO00429 736 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 ZBTB43O43298 467 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
DDX41-219ENST00000629036 CNGA1P29973 690 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 MAGEA10P43363 369 aaPredicted RBP12.87□□□□□ -0.35
DDX41-219ENST00000629036 NTRK3Q16288 839 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 TDHQ8IZJ6 230 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 IL31RAQ8NI17 732 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 FAM161BQ96MY7 647 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
DDX41-219ENST00000629036 ZHX1Q9UKY1 873 aaPredicted RBP12.87□□□□□ -0.35
DDX41-219ENST00000629036 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
DDX41-219ENST00000629036 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
DDX41-219ENST00000629036 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 DUSP11O75319 330 aaKnown RBP12.86□□□□□ -0.35
DDX41-219ENST00000629036 PGK1P00558 417 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 CST5P28325 142 aaPredicted RBP12.86□□□□□ -0.35
DDX41-219ENST00000629036 ADCYAP1R1P41586 468 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 GNAQP50148 359 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 ANAPC15P60006 121 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 RTN1Q16799 776 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 LRIT3Q3SXY7 679 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
DDX41-219ENST00000629036 NECAB2Q7Z6G3 386 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 UBE2OQ9C0C9 1292 aaKnown RBP12.86□□□□□ -0.35
DDX41-219ENST00000629036 VTA1Q9NP79 307 aa12.86□□□□□ -0.35
DDX41-219ENST00000629036 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
DDX41-219ENST00000629036 GOLGA8AA7E2F4 631 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 MEIS2O14770 477 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 RGS20O76081 388 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 ARIH2O95376 493 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 SMPD1P17405 629 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 PSMA5P28066 241 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
DDX41-219ENST00000629036 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
DDX41-219ENST00000629036 GJA9P57773 515 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 SNX17Q15036 470 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 LRRC26Q2I0M4 334 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 WWC2Q6AWC2 1192 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 MCF2L2Q86YR7 1114 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
DDX41-219ENST00000629036 KIF2CQ99661 725 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 RBM28Q9NW13 759 aaKnown RBP12.85□□□□□ -0.35
DDX41-219ENST00000629036 FAM184BQ9ULE4 1060 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
DDX41-219ENST00000629036 TRIP12Q14669 1992 aaPredicted RBP12.84□□□□□ -0.35
DDX41-219ENST00000629036 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 ADAMTS3O15072 1205 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 CFBP00751 764 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 RARBP10826 455 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 PDIA3P30101 505 aaKnown RBP12.84□□□□□ -0.35
DDX41-219ENST00000629036 PKN1Q16512 942 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 EEPD1Q7L9B9 569 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 SAMD3Q8N6K7 520 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
DDX41-219ENST00000629036 RMDN3Q96TC7 470 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
DDX41-219ENST00000629036 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
DDX41-219ENST00000629036 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
DDX41-219ENST00000629036 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
DDX41-219ENST00000629036 STXBP3O00186 592 aa12.83□□□□□ -0.36
DDX41-219ENST00000629036 METAP2P50579 478 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDX41-219ENST00000629036 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
DDX41-219ENST00000629036 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
DDX41-219ENST00000629036 GUCD1Q96NT3 240 aa12.83□□□□□ -0.36
DDX41-219ENST00000629036 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.36
DDX41-219ENST00000629036 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
DDX41-219ENST00000629036 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
DDX41-219ENST00000629036 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
DDX41-219ENST00000629036 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
DDX41-219ENST00000629036 TNFAIP2Q03169 654 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 PGM5Q15124 567 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 DUSP28Q4G0W2 176 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 USP17L6PQ6QN14 398 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 VSIG10LQ86VR7 867 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 ARRDC4Q8NCT1 418 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 IWS1Q96ST2 819 aa12.82□□□□□ -0.36
DDX41-219ENST00000629036 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
DDX41-219ENST00000629036 TSEN34Q9BSV6 310 aaKnown RBP12.82□□□□□ -0.36
DDX41-219ENST00000629036 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
DDX41-219ENST00000629036 NR3C2P08235 984 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 POLR2MP0CAP2 368 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 IFNAR1P17181 557 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 ACLYP53396 1101 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 PDE4DQ08499 809 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 TRAF1Q13077 416 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms