RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PPP1R18Q6NYC8 613 aa16.93■□□□□ 0.3
PNKP-221ENST00000627317 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
PNKP-221ENST00000627317 NSUN7Q8NE18 718 aaKnown RBP16.93■□□□□ 0.3
PNKP-221ENST00000627317 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
PNKP-221ENST00000627317 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
PNKP-221ENST00000627317 ORC3Q9UBD5 711 aaPredicted RBP16.93■□□□□ 0.3
PNKP-221ENST00000627317 LCTP09848 1927 aa16.93■□□□□ 0.3
PNKP-221ENST00000627317 POTEB2H3BUK9 544 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 STXBP3O00186 592 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 EVI5O60447 810 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 CFBP00751 764 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 BAATQ14032 418 aaPredicted RBP16.92■□□□□ 0.3
PNKP-221ENST00000627317 LRRC41Q15345 812 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 PKN1Q16512 942 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 SLC30A10Q6XR72 485 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 ARMCX2Q7L311 632 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 HSCBQ8IWL3 235 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 CCDC12Q8WUD4 166 aaPredicted RBP16.92■□□□□ 0.3
PNKP-221ENST00000627317 LLPHQ9BRT6 129 aaKnown RBP16.92■□□□□ 0.3
PNKP-221ENST00000627317 BARHL2Q9NY43 387 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 CNPY2Q9Y2B0 182 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 NR2E3Q9Y5X4 410 aa16.92■□□□□ 0.3
PNKP-221ENST00000627317 LAMA3Q16787 3333 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 JAK2O60674 1132 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 DTNBO60941 627 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 AKR1A1P14550 325 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 CALML3P27482 149 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
PNKP-221ENST00000627317 GJC2Q5T442 439 aaPredicted RBP16.91■□□□□ 0.3
PNKP-221ENST00000627317 ARRDC4Q8NCT1 418 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 CCDC148Q8NFR7 591 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 MORC4Q8TE76 937 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 WASF1Q92558 559 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 CUL5Q93034 780 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 MAF1Q9H063 256 aa16.91■□□□□ 0.3
PNKP-221ENST00000627317 COLQQ9Y215 455 aaPredicted RBP16.91■□□□□ 0.3
PNKP-221ENST00000627317 DDX49Q9Y6V7 483 aaKnown RBP16.91■□□□□ 0.3
PNKP-221ENST00000627317 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
PNKP-221ENST00000627317 K7ELQ4 463 aaPredicted RBP16.9■□□□□ 0.3
PNKP-221ENST00000627317 OPLAHO14841 1288 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 POLR2MP0CAP2 368 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 RARBP10826 455 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
PNKP-221ENST00000627317 ACVR2BQ13705 512 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 SNX17Q15036 470 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 SNX21Q969T3 373 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 PURBQ96QR8 312 aaKnown RBP16.9■□□□□ 0.3
PNKP-221ENST00000627317 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 PSTPIP2Q9H939 334 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 XPNPEP3Q9NQH7 507 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
PNKP-221ENST00000627317 PGK1P00558 417 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 XBP1P17861 261 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 HSD17B4P51659 736 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 ADCY7P51828 1080 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
PNKP-221ENST00000627317 CCSAPQ6IQ19 270 aaPredicted RBP16.89■□□□□ 0.29
PNKP-221ENST00000627317 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 C7orf61Q8IZ16 206 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 SAMD3Q8N6K7 520 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 TBC1D5Q92609 795 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 AIFM3Q96NN9 605 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 VPS54Q9P1Q0 977 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 ZHX1Q9UKY1 873 aaPredicted RBP16.89■□□□□ 0.29
PNKP-221ENST00000627317 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
PNKP-221ENST00000627317 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 HOXA13P31271 388 aaPredicted RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 MRPL12P52815 198 aaKnown RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 NKX3-2P78367 333 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 GHRHRQ02643 423 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 FAM184AQ8NB25 1140 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 KLHDC9Q8NEP7 349 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 SMARCC2Q8TAQ2 1214 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 SYTL5Q8TDW5 730 aaPredicted RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 SENP6Q9GZR1 1112 aaPredicted RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 C6orf50Q9HD87 102 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 RIC8AQ9NPQ8 531 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 SH3GLB2Q9NR46 395 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 MAP3K20Q9NYL2 800 aaKnown RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
PNKP-221ENST00000627317 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
PNKP-221ENST00000627317 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 ASB14A6NK59 587 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 KBTBD13C9JR72 458 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 CTAGE5O15320 804 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 DUSP11O75319 330 aaKnown RBP16.87■□□□□ 0.29
PNKP-221ENST00000627317 CST5P28325 142 aaPredicted RBP16.87■□□□□ 0.29
PNKP-221ENST00000627317 NLRP5P59047 1200 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 FCHSD1Q86WN1 690 aa16.87■□□□□ 0.29
PNKP-221ENST00000627317 TRIOBPQ9H2D6 2365 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms