RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SLC37A4O43826 429 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 ZMYND10O75800 440 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 UFL1O94874 794 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 ERCC3P19447 782 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 VAV2P52735 878 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 HSP90B2PQ58FF3 399 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 CNBD1Q8NA66 436 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 SMCR8Q8TEV9 937 aaPredicted RBP12.54□□□□□ -0.4
VARS2-213ENST00000625423 SECISBP2LQ93073 1101 aaKnown RBP12.54□□□□□ -0.4
VARS2-213ENST00000625423 PNMA5Q96PV4 448 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
VARS2-213ENST00000625423 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
VARS2-213ENST00000625423 TDP2O95551 362 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 RHBDL3P58872 404 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
VARS2-213ENST00000625423 SPA17Q15506 151 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 CCDC96Q2M329 555 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 COBLL1Q53SF7 1204 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 CDK5RAP3Q96JB5 506 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 NDST4Q9H3R1 872 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 POTEMA6NI47 508 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 TNNT3P45378 269 aaPredicted RBP12.53□□□□□ -0.4
VARS2-213ENST00000625423 CDK17Q00537 523 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 LARP4BQ92615 738 aaKnown RBP12.53□□□□□ -0.4
VARS2-213ENST00000625423 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 ARHGAP20Q9P2F6 1191 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 PDHBP11177 359 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 UNC13DQ70J99 1090 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 FAM71BQ8TC56 605 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 PLAGL2Q9UPG8 496 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
VARS2-213ENST00000625423 ESYT2A0FGR8 921 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 ANO9A1A5B4 782 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 EDIL3O43854 480 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.4
VARS2-213ENST00000625423 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 CERS3Q8IU89 383 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 RPGRIP1Q96KN7 1286 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.4
VARS2-213ENST00000625423 SBF2Q86WG5 1849 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 RPGRQ92834 1020 aaKnown RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 MLXIPQ9HAP2 919 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 STK17AQ9UEE5 414 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 CAPN6Q9Y6Q1 641 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 PLCG2P16885 1265 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 CAPN2P17655 700 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 MCM3P25205 808 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
VARS2-213ENST00000625423 ADCY7P51828 1080 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 ATP2B2Q01814 1243 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 C2orf54Q08AI8 447 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 CLEC10AQ8IUN9 316 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 GSPT2Q8IYD1 628 aaKnown RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 GOLGA5Q8TBA6 731 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 SNX29Q8TEQ0 813 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 HINFPQ9BQA5 517 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 PCDHA13Q9Y5I0 950 aa12.52□□□□□ -0.41
VARS2-213ENST00000625423 DDX60LQ5H9U9 1706 aaKnown RBP12.52□□□□□ -0.41
VARS2-213ENST00000625423 TARSL2A2RTX5 802 aaKnown RBP12.51□□□□□ -0.41
VARS2-213ENST00000625423 MYBL2P10244 700 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
VARS2-213ENST00000625423 ACTN2P35609 894 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
VARS2-213ENST00000625423 KIF11P52732 1056 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 LRRC41Q15345 812 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 MAN2A1Q16706 1144 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 MAP9Q49MG5 647 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 KCNK18Q7Z418 384 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 GUF1Q8N442 669 aaKnown RBP12.51□□□□□ -0.41
VARS2-213ENST00000625423 RAD54LQ92698 747 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 DEF6Q9H4E7 631 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 MYH1P12882 1939 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
VARS2-213ENST00000625423 IL1R1P14778 569 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 DDX12PQ92771 950 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 MED4Q9NPJ6 270 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 GGA1Q9UJY5 639 aa12.51□□□□□ -0.41
VARS2-213ENST00000625423 LRRC53A6NM62 1247 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms