RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 TINF2Q9BSI4 451 aa11.05□□□□□ -0.64
LINC01560-202ENST00000624822 UNC93B1Q9H1C4 597 aa11.05□□□□□ -0.64
LINC01560-202ENST00000624822 CYP39A1Q9NYL5 469 aa11.05□□□□□ -0.64
LINC01560-202ENST00000624822 DIS3Q9Y2L1 958 aaKnown RBP11.05□□□□□ -0.64
LINC01560-202ENST00000624822 KIAA1217Q5T5P2 1943 aa11.05□□□□□ -0.64
LINC01560-202ENST00000624822 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
LINC01560-202ENST00000624822 CNTNAP5Q8WYK1 1306 aa11.05□□□□□ -0.64
LINC01560-202ENST00000624822 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
LINC01560-202ENST00000624822 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
LINC01560-202ENST00000624822 PDIA3P30101 505 aaKnown RBP11.04□□□□□ -0.64
LINC01560-202ENST00000624822 ADD1P35611 737 aaKnown RBP11.04□□□□□ -0.64
LINC01560-202ENST00000624822 AK2P54819 239 aa11.04□□□□□ -0.64
LINC01560-202ENST00000624822 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
LINC01560-202ENST00000624822 CLEC4DQ8WXI8 215 aa11.04□□□□□ -0.64
LINC01560-202ENST00000624822 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01560-202ENST00000624822 ADD3Q9UEY8 706 aaKnown RBP11.04□□□□□ -0.64
LINC01560-202ENST00000624822 CNPY2Q9Y2B0 182 aa11.04□□□□□ -0.64
LINC01560-202ENST00000624822 CENPFP49454 3210 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 CPLX1O14810 134 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 CCND3P30281 292 aaPredicted RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 PRAMEF19Q5SWL8 479 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 ARMCX2Q7L311 632 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 TBC1D5Q92609 795 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 GPKOWQ92917 476 aaPredicted RBP eCLIP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 ZNF274Q96GC6 653 aaPredicted RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 DEFB118Q96PH6 123 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 PURBQ96QR8 312 aaKnown RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 NCOA5Q9HCD5 579 aaKnown RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 ZHX1Q9UKY1 873 aaPredicted RBP11.03□□□□□ -0.64
LINC01560-202ENST00000624822 HTTP42858 3142 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 NID2Q14112 1375 aa11.03□□□□□ -0.64
LINC01560-202ENST00000624822 MYH7BA7E2Y1 1941 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 ASB14A6NK59 587 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 CYBAP13498 195 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 RBM25P49756 843 aaKnown RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 ALDH5A1P51649 535 aaPredicted RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 MAP3K21Q5TCX8 1036 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 CPLX2Q6PUV4 134 aaKnown RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 U2AF1L4Q8WU68 220 aaKnown RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 CUL5Q93034 780 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 PHKBQ93100 1093 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 FAM217BQ9NTX9 383 aaPredicted RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
LINC01560-202ENST00000624822 SYNGAP1Q96PV0 1343 aa11.02□□□□□ -0.65
LINC01560-202ENST00000624822 B4DLN1 442 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 GCOM1H8Y6P7 765 aaPredicted RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 TFRCP02786 760 aaKnown RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 GJB1P08034 283 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 POLR2MP0CAP2 368 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 HOXA13P31271 388 aaPredicted RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 NAPAP54920 295 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 EVCP57679 992 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 PDE4DQ08499 809 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 ARHGEF16Q5VV41 709 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 ANO1Q5XXA6 986 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 MAMDC4Q6UXC1 1216 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 FGD4Q96M96 766 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 SLC26A6Q9BXS9 759 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 BACH2Q9BYV9 841 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 ALDH8A1Q9H2A2 487 aaPredicted RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 ABHD16BQ9H3Z7 469 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 TPCN1Q9ULQ1 816 aa11.01□□□□□ -0.65
LINC01560-202ENST00000624822 DDX49Q9Y6V7 483 aaKnown RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 KIAA0100Q14667 2235 aaKnown RBP11.01□□□□□ -0.65
LINC01560-202ENST00000624822 DOCK5Q9H7D0 1870 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 hCG_1984214I3L0E3 225 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 ARHGAP33O14559 1287 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 OPLAHO14841 1288 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 MSCO60682 206 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 SGPL1O95470 568 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
LINC01560-202ENST00000624822 EIF2AK2P19525 551 aaKnown RBP11□□□□□ -0.65
LINC01560-202ENST00000624822 EN2P19622 333 aaPredicted RBP11□□□□□ -0.65
LINC01560-202ENST00000624822 GJA8P48165 433 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 PSEN2P49810 448 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 HSD17B4P51659 736 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 SSRP1Q08945 709 aaKnown RBP11□□□□□ -0.65
LINC01560-202ENST00000624822 SCRN1Q12765 414 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 ACVR2BQ13705 512 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 WWC2Q6AWC2 1192 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
LINC01560-202ENST00000624822 TRPV1Q8NER1 839 aa11□□□□□ -0.65
LINC01560-202ENST00000624822 DNERQ8NFT8 737 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms