RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 LAD1O00515 517 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 WDR46O15213 610 aaKnown RBP11.72□□□□□ -0.53
ATRX-216ENST00000624403 POLR2DO15514 142 aaKnown RBP11.72□□□□□ -0.53
ATRX-216ENST00000624403 NEMFO60524 1076 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 CCNT1O60563 726 aaKnown RBP11.72□□□□□ -0.53
ATRX-216ENST00000624403 PTPRAP18433 802 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 ORC2Q13416 577 aaPredicted RBP11.72□□□□□ -0.53
ATRX-216ENST00000624403 DGKZQ13574 1117 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 MTMR2Q13614 643 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 NOL9Q5SY16 702 aaKnown RBP11.72□□□□□ -0.53
ATRX-216ENST00000624403 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 LPAR1Q92633 364 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
ATRX-216ENST00000624403 KLRG1Q96E93 195 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 EPSTI1Q96J88 318 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 SERTAD1Q9UHV2 236 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 DOCK1Q14185 1865 aa11.72□□□□□ -0.53
ATRX-216ENST00000624403 A0A087X0B3 334 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 MEIS2O14770 477 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 OPLAHO14841 1288 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
ATRX-216ENST00000624403 GRIN3BO60391 1043 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 USP2O75604 605 aaPredicted RBP11.71□□□□□ -0.53
ATRX-216ENST00000624403 OR52Z1P0C646 297 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 LONP1P36776 959 aaKnown RBP11.71□□□□□ -0.53
ATRX-216ENST00000624403 PRPHP41219 470 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 USP14P54578 494 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 TRAF1Q13077 416 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 SPP2Q13103 211 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 PRKG1Q13976 671 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 STX1AQ16623 288 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 ANO6Q4KMQ2 910 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 DTHD1Q6ZMT9 781 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 USP50Q70EL3 339 aaPredicted RBP11.71□□□□□ -0.53
ATRX-216ENST00000624403 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 ELOA2Q8IYF1 753 aaPredicted RBP11.71□□□□□ -0.53
ATRX-216ENST00000624403 CNNM3Q8NE01 707 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.71□□□□□ -0.53
ATRX-216ENST00000624403 AS3MTQ9HBK9 375 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.53
ATRX-216ENST00000624403 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
ATRX-216ENST00000624403 A0A087WWV3 80 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 FOXN1O15353 648 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 TDP2O95551 362 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 VCAM1P19320 739 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 EPHX2P34913 555 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 PRSS12P56730 875 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 BACE1P56817 501 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 PNOCQ13519 176 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 MCTP2Q6DN12 878 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 PDILTQ8N807 584 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 ZNF280CQ8ND82 737 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 DHX58Q96C10 678 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 ZFRQ96KR1 1074 aaKnown RBP11.7□□□□□ -0.54
ATRX-216ENST00000624403 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
ATRX-216ENST00000624403 SLF1Q9BQI6 1058 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 ANO3Q9BYT9 981 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 DNAJC25Q9H1X3 360 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 ZHX2Q9Y6X8 837 aa11.7□□□□□ -0.54
ATRX-216ENST00000624403 ABCB11O95342 1321 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 SLC37A4O43826 429 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 MDM2Q00987 491 aaPredicted RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 C11orf57Q6ZUT1 292 aaPredicted RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 KRT26Q7Z3Y9 468 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 PACS2Q86VP3 889 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 LDHDQ86WU2 507 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 PRPF38AQ8NAV1 312 aaKnown RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 FAM200AQ8TCP9 573 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 CBX8Q9HC52 389 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 TUBE1Q9UJT0 475 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 MRPL11Q9Y3B7 192 aaKnown RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 SNCAIPQ9Y6H5 919 aa11.69□□□□□ -0.54
ATRX-216ENST00000624403 GOLGB1Q14789 3259 aaKnown RBP11.69□□□□□ -0.54
ATRX-216ENST00000624403 ZNF536O15090 1300 aa11.68□□□□□ -0.54
ATRX-216ENST00000624403 PP2D1A8MPX8 630 aa11.68□□□□□ -0.54
ATRX-216ENST00000624403 PIK3CDO00329 1044 aa11.68□□□□□ -0.54
ATRX-216ENST00000624403 BIN1O00499 593 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms