RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MYH13Q9UKX3 1938 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 TNFRSF8P28908 595 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 NLRP5P59047 1200 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 IRX1P78414 480 aaPredicted RBP16.75■□□□□ 0.27
PMS1-221ENST00000624204 MAEAQ7L5Y9 396 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 NLRP3Q96P20 1036 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 EPHB6O15197 1021 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 TRAPPC3O43617 180 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 PHKG2P15735 406 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 IFFO1Q0D2I5 559 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 IL17AQ16552 155 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
PMS1-221ENST00000624204 WHAMMQ8TF30 809 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.75■□□□□ 0.27
PMS1-221ENST00000624204 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
PMS1-221ENST00000624204 ENO4A6NNW6 628 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 RTN2O75298 545 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 EHHADHQ08426 723 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 ZKSCAN8Q15776 578 aaPredicted RBP16.74■□□□□ 0.27
PMS1-221ENST00000624204 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 PKN1Q16512 942 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 HLFQ16534 295 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 CDC37Q16543 378 aaPredicted RBP16.74■□□□□ 0.27
PMS1-221ENST00000624204 KLHDC7AQ5VTJ3 777 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 TTI2Q6NXR4 508 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 MICAL1Q8TDZ2 1067 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 RAPGEF5Q92565 580 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 NLRC4Q9NPP4 1024 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 TLDC2A0PJX2 215 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 RAD51CO43502 376 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 ATP6V1G2O95670 118 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 SLC1A4P43007 532 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 TMTC2Q8N394 836 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 ABCF2Q9UG63 623 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 TNKSO95271 1327 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 CYP2D7A0A087X1C5 515 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 HSD17B3P37058 310 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 TBC1D1Q86TI0 1168 aaPredicted RBP16.74■□□□□ 0.27
PMS1-221ENST00000624204 CD302Q8IX05 232 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 ARMC2Q8NEN0 867 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 PYM1Q9BRP8 204 aaKnown RBP16.74■□□□□ 0.27
PMS1-221ENST00000624204 NACAP1Q9BZK3 213 aa16.74■□□□□ 0.27
PMS1-221ENST00000624204 ELF3P78545 371 aaPredicted RBP16.73■□□□□ 0.27
PMS1-221ENST00000624204 CACNA2D4Q7Z3S7 1137 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 LRRC53A6NM62 1247 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 KIF4AO95239 1232 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 MAGOHP61326 146 aaKnown RBP16.73■□□□□ 0.27
PMS1-221ENST00000624204 ANKRD40Q6AI12 368 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 CUL5Q93034 780 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 MAGOHBQ96A72 148 aaKnown RBP16.73■□□□□ 0.27
PMS1-221ENST00000624204 DUSP9Q99956 384 aaKnown RBP16.73■□□□□ 0.27
PMS1-221ENST00000624204 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 PALMO75781 387 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 UBA7P41226 1012 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 MDM1Q8TC05 714 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 LPIN2Q92539 896 aa16.73■□□□□ 0.27
PMS1-221ENST00000624204 CNOT8Q9UFF9 292 aaKnown RBP16.73■□□□□ 0.27
PMS1-221ENST00000624204 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 DCDC2CA8MYV0 355 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 PPP2R2AP63151 447 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 XRCC4Q13426 336 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 ADAT2Q7Z6V5 191 aaKnown RBP16.72■□□□□ 0.27
PMS1-221ENST00000624204 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 CCDC63Q8NA47 563 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
PMS1-221ENST00000624204 SDR42E1Q8WUS8 393 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 SPATS2LQ9NUQ6 558 aaKnown RBP16.72■□□□□ 0.27
PMS1-221ENST00000624204 EME2A4GXA9 379 aaPredicted RBP16.72■□□□□ 0.27
PMS1-221ENST00000624204 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 KIF3CO14782 793 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 PDE4DQ08499 809 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 NBPF9Q3BBW0 867 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 KRT71Q3SY84 523 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 MREGQ8N565 214 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 CEP120Q8N960 986 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 CABLES1Q8TDN4 633 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 DISC1Q9NRI5 854 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 SLC12A6Q9UHW9 1150 aa16.72■□□□□ 0.27
PMS1-221ENST00000624204 EMC10Q5UCC4 262 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 P2RX5Q93086 422 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.27
PMS1-221ENST00000624204 TNNC1P63316 161 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 FAM133BQ5BKY9 247 aaKnown RBP16.71■□□□□ 0.27
PMS1-221ENST00000624204 RUFY4Q6ZNE9 571 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 MAGEC3Q8TD91 643 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 LMBR1Q8WVP7 490 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 TAF1DQ9H5J8 278 aaPredicted RBP16.71■□□□□ 0.27
PMS1-221ENST00000624204 C5P01031 1676 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 MGRN1O60291 552 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 ZNF844Q08AG5 666 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
PMS1-221ENST00000624204 LCORLQ8N3X6 602 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms